Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00049 ATGGATCCGTGCTCTTATGTACGGATACTCATCGGAAACCTTGCAATCAAATCACCTGCATCATCAAAACCATCTTTCTCCGGCAAAGTTCATCCCTCAACTTCAACTTGCTACTGTAAAATCAAGCTCAAAGGCGTTGATTCTCCACCTTGCCACGTGGCAACAGTTCCTCTAATATCAGAATCAGACACACACCCTCATTCTTTAGCTGCTAGTTTCGATTTCCCAAAATCACAAATCTCAAACATCAATAACCCTTTCATTAAAATCTCTGTTTTCAAAGCAAGCACAAATCCTTCATGTGTTTTCAATTCTGCAAAATTATTGGGAAAAATTACAATACCACTTGATCTTGCTTCAGTAGAATCACGACCTTGTTCTTTTCACAACGGTTGGGTCTCTCTCACTCGCAACAACAACAACAAAACCAATTCAACTCAATTATTGCATTTAACTGTACGGGCTGAACCGGACCCGAGATTTATTTTCCGCTTCGACGGTGAACCGGAGTGTAGTCCACAGGTTTTTCAAGTCAAAGGAGAAGTGAAACAACCGGTTTTCACTTGCAAGTTCAGTTTCAGAGACAGAAACCCGGTTCAATTTCCTTCAACGAATGCAAATTTAGTAGCGGATCGAAAAGGATGGTCTATTACAATACACGATTTATCAGGTTCACCGGTTGCGTGTGCTTCCATGGTTACACCGTTTGTTCCTTCACCCGGTTCACAACGGGTCAGTAAATCCAACCCGGGAGCTTGGCTTATTATCCGACCCGATGGAGATGGTACATGGAAGCCTTGGGGTCGTCTTGAAGCTTGGCGCGAGCCTGGTAATTCAAACTCCGTCGGTTACCGTTTCGACGTTCTTCCGGCCACCGCCGACCCGGTCACACTCGCCGGATGTACTATTAGTTCACAGCATGGAGGTAAATTCACTATTGATGTTACTTCAGGTGTTACTCCGGCGAGTACACCAAACGGAAGCTGGGATCTTAGTTCGGGTTCGGGTTCACGGTCCGGTTCTGGATCCGGTTCGGATTTCTTCATTGAGAATCAGTTTTTGTACAGAGGTTTTGTGATGTCGGCGAGATTTGACGGTGAAAAAAAATGCAGTAAACCAGAGGTGGAGGTTGGTGTGAAGCACGTGAATTGTGCGGAGGATGCTGCGGCATTCGTTGCTCTTGCAGCAGCCATGGATTTGAGCATGGATGCGTGCAAATTGTTCTCTGAGAAACTAAGAAAAGAGTTACGGCAATAG 1257 0.4511 MDPCSYVRILIGNLAIKSPASSKPSFSGKVHPSTSTCYCKIKLKGVDSPPCHVATVPLISESDTHPHSLAASFDFPKSQISNINNPFIKISVFKASTNPSCVFNSAKLLGKITIPLDLASVESRPCSFHNGWVSLTRNNNNKTNSTQLLHLTVRAEPDPRFIFRFDGEPECSPQVFQVKGEVKQPVFTCKFSFRDRNPVQFPSTNANLVADRKGWSITIHDLSGSPVACASMVTPFVPSPGSQRVSKSNPGAWLIIRPDGDGTWKPWGRLEAWREPGNSNSVGYRFDVLPATADPVTLAGCTISSQHGGKFTIDVTSGVTPASTPNGSWDLSSGSGSRSGSGSGSDFFIENQFLYRGFVMSARFDGEKKCSKPEVEVGVKHVNCAEDAAAFVALAAAMDLSMDACKLFSEKLRKELRQ 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00049 418 PANTHER OS08G0163500 PROTEIN 1 418 IPR010410 -
Trre9g00049 418 Pfam Protein of unknown function (DUF1005) 1 417 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00049 Trre-Chr9 559007 560263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00049 - - gmx:100816033 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00049 9 559007 560263 Trre9g00049 9 559007 560263 ECH