Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00026 ATGGGTGAAGAAGAAGAAGAAATAGTAGTAACTGATGATGATAATGCTCCCAACAAATCCAATCATAAACTAACCTTATTACCTCTCATTGCTCTCATCTTCTATGAAGTTTCCGGTGGTCCTTTCGGAGTCGAAGATTCTGTCAGAGCAGGTGGAGGTCCTCTTTTATCCTTACTCGGTTTCCTCTTTTTTCCTCTTATCTGGAGCCTTCCTGAAGCTCTTATCACCGCCGAACTCGCCACCACCTTCCCTCATAACGGCGGTTATGTTATTTGGATTTCCTCTGCTTTTGGACCCTTTTGGGGTTTTCAAGAAGGCTTTTGGAAATGGTTTAGTGGTGTCATGGATAATGCTCTTTACCCTGTTTTATTCCTTGATTACTTGAAACAATCTTTTCCTATTTTTAACTTAATGATAGCTCGAATCCCTGCTTTGTTGGGGATCACATTTTCACTCACTTACCTGAATTATAGAGGTCTTCACATTGTTGGTTTCTCTGCTGTTCTTCTTGCCATTTTCTCACTTTCACCGTTTTTTCTTATGGCTCTTCTTTCCATTCCTAAAATCAGACCAAGACGATGGTTTGTTGTAGATTTTAAAAAGGTCAATTGGCGTGGTTACTTCAATAACATGTTCTGGAATTTGAATTATTGGGATAAGGCTAGTACCCTTGCTGGGGAGGTTCAAAATCCAAGTAAAACATTCCCAAAAGCACTTTTTGGAGGAATGCTTTTGGTGATCTGTTCCTATTTGATTCCACTGCTTGCAGGAACAGGTGCTTTCAGTTCATCTTCAAATGAATGGGCTGATGGCTATTTTGCTCAAGTGGGGATGTTGATTGGTGGATTTTGGCTTAAACTGTGGATTCAAGCCGCGGCTGCCATGTCTAACCTTGGCTTGTTTGAAGCTGAAATGAGCAGTGATGCTTTTCAACTTCTAGGGATGAGCAAAATGGGGTTGCTTCCAGCTATATTCTCATCAAGGTCTAAGTATGGAACGCCGACTGTTAGCATTTTGTTCTCTGCAACTGGAGTTATCTTCCTGTCATGGATGAGCTTTCAGCAAATACTGGAGTTCCTCAATTTCTTATATGCTATAGGAATGCTTCTTGAGTTTGCAGCTTTTATAACTTTGAGATTGAAGAAGCCAAATCTCTGCAGACCTTACAGAGTTCCGTTGCAAACATTTTGGGCGTCCATGCTTTGCTTGCCTCCTGCTCTGCTACTTATTCTTGTTATGTGTCTGGCTTCTTTGAGAACGTTCTTTGTGAGTGGAGCAGTAGTAATCGTTGGATTTATCTTATACGCTATTTTGGTTCAAGCCAAGAATAAAAAATGGTTACTATTTGAAGCCGAACAACCCTCGTCTCCTTCTAATGGTTGGCAGCCATGCCAATCAATTGTCTCAGGACTGGCTGGCCATGACAACAAGGATTCTGAGCTTCTTTTGAGATCACCATTGCCTGTTGTGGAAGAAGAATTATCTTTGATGCAAAGTGATTCTAAGCCAAACTAG 1515 0.4112 MGEEEEEIVVTDDDNAPNKSNHKLTLLPLIALIFYEVSGGPFGVEDSVRAGGGPLLSLLGFLFFPLIWSLPEALITAELATTFPHNGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKQSFPIFNLMIARIPALLGITFSLTYLNYRGLHIVGFSAVLLAIFSLSPFFLMALLSIPKIRPRRWFVVDFKKVNWRGYFNNMFWNLNYWDKASTLAGEVQNPSKTFPKALFGGMLLVICSYLIPLLAGTGAFSSSSNEWADGYFAQVGMLIGGFWLKLWIQAAAAMSNLGLFEAEMSSDAFQLLGMSKMGLLPAIFSSRSKYGTPTVSILFSATGVIFLSWMSFQQILEFLNFLYAIGMLLEFAAFITLRLKKPNLCRPYRVPLQTFWASMLCLPPALLLILVMCLASLRTFFVSGAVVIVGFILYAILVQAKNKKWLLFEAEQPSSPSNGWQPCQSIVSGLAGHDNKDSELLLRSPLPVVEEELSLMQSDSKPN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00026 504 PIRSF AA_transporter 1 458 - -
Trre9g00026 504 Gene3D Amino acid/polyamine transporter I 19 454 - -
Trre9g00026 504 PANTHER POLYAMINE TRANSPORTER PUT1 13 454 IPR044566 GO:0022857
Trre9g00026 504 Pfam Amino acid permease 27 410 IPR002293 GO:0016020|GO:0022857|GO:0055085
Trre9g00026 504 FunFam Amino acid permease, putative 20 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00026 Trre-Chr9 376678 378451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00026 5 480 Organic Solute Cotransporters AT3G19553 72.956 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00026 - - vun:114172952 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00026 9 376678 378451 Trre9g00026 9 376678 378451 ECH