Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00011 ATGGGTGAAATGAGTGGAGATGATGAACCTCTAACACCAGCAGGGAGGCTGTTCCAGCAGCCACAGATGAACCAAGTAATCCACTGTGTGATAGGGTTGAAGAATCCAATAGATGTTGATTTAATAAAAACAGAAATCGAGAAATCAGTTATGCTACAACACCCTAGGTTCACCAGCCTGATGGTTCGTGACCACAGAGGCGTGGAACACTGGCGTCAAACCAAAATCGACATGGAGAGCCACTTTCGAGTGATCGAGCATCGAGTGTCTGAGGATGATGATGATGATGATGATGATGAATCGGCCATCAACGAGTATGTGTCTGATTTATGCACCGTATCTCAACTGAGCATGGATAAACCCCTGTGGGAGATACATATCCTTATGGCCCACAAGTGCATCATATTTCGAATCCATCACTCACTTGGAGACGGTATTTCACTCATGTCTATGCTCCTCGCTGGCTGTAGGAAGCTCCAAGATCCCCAATCACTTCCCTCAATATCTATCCCCAATGCTAAACCTCCCCCAACTTTCTGGAATATTCTCGTTACCCTCTTTTTTTCTTTTATCTTTGTCATCCAATTTGTACTCAGGTGTCTCTGGATTCGTGACCGCAAAACCGCCATATCCGGCGGCTCCGGCGTTGACCTCTGGCCTAGGAAAATCGCCACTGCTTCCTTTTCATTGGAACACATGAAAATAGTCAAAGCTTCTGTTCCTAACGCGACCATAAACGACGTTCTATTTGCAGTTATATCATCTGGAATATCAAGATACCTGGACTTCAGAGAACCTAATGGCCTGCGAGACGGTGTTCAGCTAACAGGATTAGCTATGGTTAACTTAAGAAAGCAGCCAGGATTGCAGGAACTGTCGAATTTGATGAAAAGCAATTCAGGGGCTAGGTGGGGAAACAAATTTGGTATGATCCTACTGCCTATATATTATCATAGAAGCAACAACTCAGATCCTCTAGAATATTTGAAGAGAGCTAAAGTGATGATTGACAGAAAGAAACAATCTCTGGAGTCCCATTTGTCATACAAAATTGGAGATTTTGTAATGTCCACTCTTGGTCCAAAGTTTGCTAGCTTGCTAAATTATCGGATACTCTGCAACACCACCTTTACAATCTCAAATGTGGTTGGCCCGCAAGAGGAGATTATGATTGGAGGCAATCCAGTAACGTTCTTAAGGGCAAATAATTCTGCTTTGCCTCATGCACTTGTTTTGAATATGGTGAGCTATGCTGGAAAGGCAGACATGCAAGTGCAGGTGGCTAAAGACATCATTCCCGATCCTCAGTTTCTAGCCAAGTGCTTTGAAGATGCATTACTTGAAATGAAGGAACAGGTTACTGCCAAAATCTCACATTAA 1380 0.4348 MGEMSGDDEPLTPAGRLFQQPQMNQVIHCVIGLKNPIDVDLIKTEIEKSVMLQHPRFTSLMVRDHRGVEHWRQTKIDMESHFRVIEHRVSEDDDDDDDDESAINEYVSDLCTVSQLSMDKPLWEIHILMAHKCIIFRIHHSLGDGISLMSMLLAGCRKLQDPQSLPSISIPNAKPPPTFWNILVTLFFSFIFVIQFVLRCLWIRDRKTAISGGSGVDLWPRKIATASFSLEHMKIVKASVPNATINDVLFAVISSGISRYLDFREPNGLRDGVQLTGLAMVNLRKQPGLQELSNLMKSNSGARWGNKFGMILLPIYYHRSNNSDPLEYLKRAKVMIDRKKQSLESHLSYKIGDFVMSTLGPKFASLLNYRILCNTTFTISNVVGPQEEIMIGGNPVTFLRANNSALPHALVLNMVSYAGKADMQVQVAKDIIPDPQFLAKCFEDALLEMKEQVTAKISH 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00011 459 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 71 168 IPR004255 GO:0004144|GO:0045017
Trre9g00011 459 Pfam WS/DGAT C-terminal domain 304 450 IPR009721 -
Trre9g00011 459 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 8 456 IPR045034 GO:0008374|GO:0045017
Trre9g00011 459 SUPERFAMILY CoA-dependent acyltransferases 10 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00011 Trre-Chr9 249245 252745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00011 7 453 Acyl Lipid Metabolism Gene Families AT5G53390 34.316 2.43e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00011 - - aprc:113868708 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00011 9 249245 252745 Trre9g00011 9 249245 252745 ECH