Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05982 ATGCCACCAAGAAGAACAAGAAGACCAAGAAGATTAGTAAAATTAGAAGATGTTGCCACATGTGTTGGTAGTCGAGTTGACATCATAGCTGTTGTTAATGATGTTGGACTTCCCAAGATCACTCGGGGCACTGATTTGGTTTGTACCATAAGAGTGATCGATGAAACAAAATATCAAACTGGAACGACCATCAACCTTTTTCTCCAAAATGCACAAGCTTTTCCCCGTTTTGAAGCTGCTGGAGATATAATTCAGCTCTGTAATGTTAAGCTTGAATCATATCAAGAAGAAGTAAATGCTACTTTCTACAAAGACTCTTCCTCTTTTGCCTTATTTCAAGGGAGGTATGGTGTTGATTATGACCCTTATCAACAATATTCACCAGATGATTCAAGAGTTACCAACAGAGAAGTCGATAGAAATCGCATAGACGATCTTAGAGATTGGTTGGCCAATTTTCAGATTCCTCAAGTTTCAGGTGACTTTCCTATGTTAAGAGAAATCAAAGAAGGTCACTTAAATTTGGCATGCAAGATACTTCATTGCTGGAAGGCTGCAAATCAATGGTTTGTTTATGTGTGGGATGGTACAGATACCCCACCAAATGTCATGAATGCAATGCCAAATGATGAAATTAATTCTCCACTTCCATTAGAGTTGGAACCGCCTTTGCCAAGAGATATATTACATACTTTTCCTACTGTTGGATCTATATTGAGGATTAATTTTGGACAATTTGTGGAGACAAATCATCTCCCAATTCTTAACACTGATAAATGGGTCAAGTTTGTCTATTTAAATCTCAGAGTTGATTCAGCGTCAAGACTATGGCATGGCAATTTTAACCCACAATCAAAAATTCGATACACACCACACGATGATTGTCTCATTACAGAACGTCAAAGGTTGAGCGATGATCGGATATCGTTGACATCAAGAAAAGATTTTATTGAGATGATTCCTCAGTCTATCAGCAGTTTATCCGAGGTTTTTCGTATTACAAGGGTTGAAGACGATCACAAAAAAAGGCGTTATTCTACTTTAATGCGTGTACTCAATCATTCGAAGGAGACAAAAATATTCAAGTGTGTTGTTCGAGTAGTAGCAGTGGAGCCATCTCAAGTTGAAAATTTCTATTGTCCTATTGAAAAGAAGTATAGGATGAGACTCACTCTAGAGGATCCAACATCAAGAATTTATGCTTTTGTATTTGATAAAGATGGGGAAACTCTTTTTGATGGTTACCCTAGCATTGCAAATTTGAAAAAAAAATTAAACAGATTACTTGGAATTGTTGAATGCGAAGGGAATGATGTATCAGATATCCCAAGAAATCCTCCATGGGTGAATGTATGTATCAAGTCATATTATAAGTCTAAAACTAATCAACGAGGAAGTAGAATCTTTGCTTTATATGACACTAAAATATTTGGTGACCCTTAA 1443 0.3659 MPPRRTRRPRRLVKLEDVATCVGSRVDIIAVVNDVGLPKITRGTDLVCTIRVIDETKYQTGTTINLFLQNAQAFPRFEAAGDIIQLCNVKLESYQEEVNATFYKDSSSFALFQGRYGVDYDPYQQYSPDDSRVTNREVDRNRIDDLRDWLANFQIPQVSGDFPMLREIKEGHLNLACKILHCWKAANQWFVYVWDGTDTPPNVMNAMPNDEINSPLPLELEPPLPRDILHTFPTVGSILRINFGQFVETNHLPILNTDKWVKFVYLNLRVDSASRLWHGNFNPQSKIRYTPHDDCLITERQRLSDDRISLTSRKDFIEMIPQSISSLSEVFRITRVEDDHKKRRYSTLMRVLNHSKETKIFKCVVRVVAVEPSQVENFYCPIEKKYRMRLTLEDPTSRIYAFVFDKDGETLFDGYPSIANLKKKLNRLLGIVECEGNDVSDIPRNPPWVNVCIKSYYKSKTNQRGSRIFALYDTKIFGDP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05982 480 SUPERFAMILY Nucleic acid-binding proteins 13 153 IPR012340 -
Trre7g05982 480 SUPERFAMILY Nucleic acid-binding proteins 173 268 IPR012340 -
Trre7g05982 480 CDD hPOT1_OB1_like 12 151 - -
Trre7g05982 480 Gene3D - 12 159 IPR012340 -
Trre7g05982 480 PANTHER PROTECTION OF TELOMERES 1 11 476 IPR028389 GO:0000723|GO:0043047
Trre7g05982 480 SMART Telo_bind_a_2 12 151 IPR011564 GO:0000723|GO:0000781|GO:0003677
Trre7g05982 480 Pfam Telomeric single stranded DNA binding POT1/CDC13 23 150 IPR011564 GO:0000723|GO:0000781|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05982 Trre-Chr7 64109898 64113669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05982 - - tpra:123918051 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05982 7 64109898 64113669 Trre7g05982 7 64109898 64113669 ECH