Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05960 ATGGGCACTGTGATTGACTCTCATTTCTTAGCCCTCACTGCCATAGTCACCATTGCATATCAGCTTCTGTTTTTCATCATCACTGCACTCCTCAAATTCGATAAGGTCACTGATTTTGCCGGAAGTACAAATTTCGTTATAATCGCTATATTGACCTTAGTGCTCAAAGGCTCTTGGCACTTTCGACAGGTAATCCTCACTCTTTTTGTGGTATTATGGGGTCTTCGCCTTGCCTTTTTTCTCCTACTCAGGATTTTACAATGGGGAGAGGATAGACGCTTTGATCAAATGCGCAATAATTTGGCTAAATTGGCCGTCTTCTGGATATTTCAGGCTGTCTGGGTTTGGGCCGTCAGTTTACCTGTTACCGTTGTTAATGCAACCGATAGCAATCCCTTTCTACAGGCTGTCGATTTAATTGGCTGGCTTATGTGGGCTGTGGGTTTTATGATTGAAGGTGCCGCAGATCAACAAAAATTGAGTTTCAAAAAGTCCCCAGAAAATAGAGGCAAGTGGTGCGATGCTGGACTTTGGAAATATACTCGCCATCCTAACTATTTTGGCGAGATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTATACTCAACAACGCTGAATGGCTGGTAATCATTGGACCAATCTTTCTAACACTGCTGCTTCTTTTCATCAGTGGCATTCCGCTGCTCGAGGAATCAGCAGATAAGAAGTTTGGCAACGTTGATGGATATAGGGTATACAAACAAAGAACCAGCCCCTTAATCCCATTGCCACCACCAATCTATGGAAAGTTACCTGCATGGTTCAAATCAGTTTTTCTCTTGGAATTTCCACTCTACAGTCGTAATTTTCCACAACAAGAACAAAACTGGTGTAGAACAAGCAGTGGGAAAAGCAATGATGCCTCGAAAATTGGGTAG 924 0.4286 MGTVIDSHFLALTAIVTIAYQLLFFIITALLKFDKVTDFAGSTNFVIIAILTLVLKGSWHFRQVILTLFVVLWGLRLAFFLLLRILQWGEDRRFDQMRNNLAKLAVFWIFQAVWVWAVSLPVTVVNATDSNPFLQAVDLIGWLMWAVGFMIEGAADQQKLSFKKSPENRGKWCDAGLWKYTRHPNYFGEILLWWGIFVASTPILNNAEWLVIIGPIFLTLLLLFISGIPLLEESADKKFGNVDGYRVYKQRTSPLIPLPPPIYGKLPAWFKSVFLLEFPLYSRNFPQQEQNWCRTSSGKSNDASKIG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05960 307 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 141 209 IPR001104 GO:0006629|GO:0016627
Trre7g05960 307 Gene3D - 58 258 - -
Trre7g05960 307 FunFam 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) 59 259 - -
Trre7g05960 307 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 4 283 IPR010721 -
Trre7g05960 307 Pfam Protein of unknown function (DUF1295) 24 252 IPR010721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05960 Trre-Chr7 63976407 63978675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05960 - - mtr:11415765 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05960 7 63976407 63978675 Trre7g05960 7 63976407 63978675 ECH