Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05822 ATGGCGGGTTCTTCATCTTCAATCATGGACAATCTCTTCCAACGAACCCTCGACGATCTCATCAAATCCATGCGTCTTCAACTTCTCAACGAATCAACTTTCATTTCTAAATCAATTGAAGATATTCGTCGCGAAATCAAATCCACCGATCCACAAACCAAATCAACCGCTCTCCAAAAACTCACCTACCTCTCCTCTATCCACGGCGTCGATATGTCATGGGCCTCTTTTCACGTCGTCGAGCTTCGTAAAGATCTTTCATCAACGAATCACTTTCATGCTTCACTTGCGCTTCATTGTTTATCAACTATAGCTACTCTCGACCTCGCGCGTGATCTCACTCCCGATCTTTTCAATTTGTTGTCGTCTTCTAGGGTTTTTATTAGGAATAAAGCTATTGCTGTTGTTTTGAGGGTTTTTGATAAGTATCCTGATGCTGTTAGGGTTTGCTTTAAGCGATTGGTAGAGAATTTAGAAAGTTCTGATCCTCAGGTAGTTACTGCTGTTATTGGAGTTTTCTGTGAACTTAGTTCTAAGGATCCGAGACCGTATCTTCAATTGGCGCCGGAATTTCATAGGATTTTGGTTAATTCTAAGAATAATTGGGTTCTGATTAAGGTTTTGAAGATTTTTGCTAGGTTGGCTCCTTTAGAACCTAGGTTAGGGAAGAAGATTGTTGAACCTATTTGTGAGCATATTAGAAGATCTGGAGCAAAATCGCTTGTTTTTGAATGTGTGAGGACTGTGATTACTAGCTTGAGTGATCATGAGTCTGCTGTTAAGTTGGCAGTTTCGAAAATTAGGGAGTTGTTGGTTGATCAGGATCCTAATCTTAGGTATCTTGGTCTGCATGCACTTTCGGTTGCTGCACCGAAGCATTTGTGGGCGGTTTTGGAGAATAAGGATGCTGTGATTAAATCTCTGGATGATGAAGATTCGAATATTAAAATTGAGTCCTTGCGGTTGTTGATGGCCATGGTGTCGGAGAGCAATGTTGTAGAGATATCTAGGGTGTTGCTTAATTATGCATTGAAATCTGATCCAGAGTTTTGCAATGAGATATTGGGTTCCATTTTAACCACATGTGGTAGGAACGATTATGAGATTATTATTGATTTTGATTGGTATGTATCTCTTTTAGGAGAAATGGCAACAATTCCTCATTGCCAAAAGGATGAAGAAATTGAGAATCAGCTTATTGATATTGGCATGAGGGTTAAGGATGCTAGGTTGCAGCTTGTTCGGGTTGCTCGTGATCTGTTGATTGATCCTGCATTGTTGGGTAACATGTACTTGCATAGGATATTGTGTGCCGCTGCTTGGGTAGCTGGAGAGTATGTACAGCTTGTGAGAAATCCACTTGAACTCATTGATGCTCTCGTACAGCCTCGGACCAATCTCTTGCCTCCGTCAGTAAGAGCAGTTTATATCAATTCTGTTCTTAAAGTTTTAAGTTTTTGCCTGGAATGTTACCTTGATCAAGTTGAGGGTACTGTGTCCTCATATTGTGGCAATTTGGCTGGTGGACAGTCAGAAATGTTTCTTGTAAAAAACCACACCGAAGCTCCTGAATTAGTAGCAACAACACGTGAAGGTTCAAATTATGAACAAGATGAGGGCTTTAACCCAAGGAATACAACCGTTGAATCTTCTGATGATCTGTCTGATGAAAATGACACAGATAGAGTTGTCACTCTTTTTTCGATGAAGAATATCACACATGAATCTGTTGTAAGCCTATTAAATCGAATTGAATTAATTTTTAGTTCACTAACAGCAAATCAGGATGCCGAAGTACTAGAGAGAGCACGAAACATATTTAACTTTGTACAATTGGTTAAAGCAGAAATAATTGATAACTCAGGTCAGAATGTGGAGACCATGGACAAGAAATATACTCAACTTTCAGCTGTTATCAAATCGATCCGCGATGCTTTTTCCATGGAACTTGGTCCAGTCTCGATAAGTGCACAGGGAAGAGTTGCTGTACCAGATGGCTTAGTTCTTAAAGAGAATCTCGACGACTTAAAATCATTATGCGGTGATATTGAGCTACCTTCATCATGCTCGTTTTACACAGGAGGTCCTCAATTTGGCACTGCTTCGGACGCTTCGTCATCTAATCTTCTGAAAAATGATGAGTCAGGGCCGATAAATGAATCTACATCCTTGCTTGAACACCGTAAGCGGCATGGATTATATTACCTTGCTTCTGATAAGAGTGAAACTGTTCCAAATGATTATCCTCCAGCAAATGACCCCAAGGCGAACAGTAATATAAATGATGAAGCTGATGCGCTAGCCAAGTTGACTGAACAATCACTTCTTTTGAAGAAAAAGACAAATCAAATGAAGCCTAGGCCTGTAGTAGTAAAATTAGATGATGGAGATGCAGCACCAGTTCCAGACAAAAGGCCAGAGCCAATAAATGATTCTCTTTCTGGCGCCATAAAAGATGTTCTTCTAGGAAGTGAAACCAACCTAAGTGTGTCTCGAAGTAATCCTCTTGATAAGTCATCAACTAAGCGGAAAGGGAAGAAGAAACTAGGCACAGATCTTCCATCTGAAATGAAAGAAAATCTAGGTGATGCAGAAAAGCCTGATCCCAAAAATCCCAACCCGAGTAGCAAAAGTAAAGAGAGAAGACGAAGAGGTAAAGAGAAGGTTGGTGAAGGGGAAGAATCTGATCAGAGGGGAAAGAAAAAGAGTAGCCACAGACATGGAAGGCATAAAACTCATCAAAGGGCCAATTCACCCTTAAATGTGGTTTCCCAAGCACCAGTAATTCCTGATTTTCTTTTGTAG 2805 0.4039 MAGSSSSIMDNLFQRTLDDLIKSMRLQLLNESTFISKSIEDIRREIKSTDPQTKSTALQKLTYLSSIHGVDMSWASFHVVELRKDLSSTNHFHASLALHCLSTIATLDLARDLTPDLFNLLSSSRVFIRNKAIAVVLRVFDKYPDAVRVCFKRLVENLESSDPQVVTAVIGVFCELSSKDPRPYLQLAPEFHRILVNSKNNWVLIKVLKIFARLAPLEPRLGKKIVEPICEHIRRSGAKSLVFECVRTVITSLSDHESAVKLAVSKIRELLVDQDPNLRYLGLHALSVAAPKHLWAVLENKDAVIKSLDDEDSNIKIESLRLLMAMVSESNVVEISRVLLNYALKSDPEFCNEILGSILTTCGRNDYEIIIDFDWYVSLLGEMATIPHCQKDEEIENQLIDIGMRVKDARLQLVRVARDLLIDPALLGNMYLHRILCAAAWVAGEYVQLVRNPLELIDALVQPRTNLLPPSVRAVYINSVLKVLSFCLECYLDQVEGTVSSYCGNLAGGQSEMFLVKNHTEAPELVATTREGSNYEQDEGFNPRNTTVESSDDLSDENDTDRVVTLFSMKNITHESVVSLLNRIELIFSSLTANQDAEVLERARNIFNFVQLVKAEIIDNSGQNVETMDKKYTQLSAVIKSIRDAFSMELGPVSISAQGRVAVPDGLVLKENLDDLKSLCGDIELPSSCSFYTGGPQFGTASDASSSNLLKNDESGPINESTSLLEHRKRHGLYYLASDKSETVPNDYPPANDPKANSNINDEADALAKLTEQSLLLKKKTNQMKPRPVVVKLDDGDAAPVPDKRPEPINDSLSGAIKDVLLGSETNLSVSRSNPLDKSSTKRKGKKKLGTDLPSEMKENLGDAEKPDPKNPNPSSKSKERRRRGKEKVGEGEESDQRGKKKSSHRHGRHKTHQRANSPLNVVSQAPVIPDFLL 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05822 934 Gene3D - 5 508 IPR011989 -
Trre7g05822 934 Pfam Adaptin N terminal region 82 481 IPR002553 GO:0006886|GO:0016192|GO:0030117
Trre7g05822 934 SUPERFAMILY ARM repeat 31 610 IPR016024 -
Trre7g05822 934 PIRSF AP3_delta 81 927 IPR017105 GO:0015031|GO:0030123
Trre7g05822 934 PIRSF AP3_delta 1 83 IPR017105 GO:0015031|GO:0030123
Trre7g05822 934 MobiDBLite consensus disorder prediction 530 549 - -
Trre7g05822 934 MobiDBLite consensus disorder prediction 846 901 - -
Trre7g05822 934 MobiDBLite consensus disorder prediction 787 812 - -
Trre7g05822 934 MobiDBLite consensus disorder prediction 702 721 - -
Trre7g05822 934 MobiDBLite consensus disorder prediction 828 934 - -
Trre7g05822 934 PANTHER DELTA ADAPTIN-RELATED 82 933 IPR017105 GO:0015031|GO:0030123
Trre7g05822 934 MobiDBLite consensus disorder prediction 528 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05822 Trre-Chr7 63023484 63026390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05822 K12396 - gmx:100815221 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05822 7 63023484 63026390 Trre7g05822 7 63023484 63026390 ECH