Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05599 ATGGCGATCTCATCACAATCCTTCCCACCTTCCTTCATCTCAACACCCAACGATTTGACTCGTCCAACTCGTCTTCCCTCCCGAGTCACCTTCACTCACTTCCGCAAAACCCAAACCCGCTCTTCACCTCTCCGATTCACCGTTTCTTCTCGTCTCAACTCATCTAAATCCTCCGATGCCGGCGGTTCACTTTCTCCGGACAACGGCGATGTTCAATACGAACTTCATCACGATCTTTCTCCACAGCGTCGGAGACGCGGATTGCCGGTGTTTGTTACGCTTCCGGTGAAATCTGTTGGGAAAGAGGGGAAAATTTGGAGGCCGAAAGCGATGATGCTGTCGTTGAAAGCTCTTGCTTCTGCTGGTGTTGAAGGTGTTGTTGTGGAGATTTGGTGGGGTGTGGTTGAAAGGAATGAGCCTAGGGTTTATGATTGGAGAGGTTATCGTGAACTTGTTATGATGGCTTGCATGTGTGGACTTAAAGTTCGAGCTGTTCTTGCGTTTCATCAACATGGAATTGATGGTGATGATCTTAATGGGATACCACTTCCTCTATGGGTGCTTGATGAGATACATACAGACCCGGATTTAGCATTTTCTGATAGGTTTGGAAGAAGAAATATTGAGTACATTTCCCTTGGGTGTGATATTCTTCCTGTGCTGCGTGGACGTTCTCCCGTTCAAGTATATGCAGATTTTATGAGGGACTTCAGGGACACCTTTAGGCCTTATCTGGGCATTATCATTACAGGAGTCCAAATTGGCATGGGTCCTGGTGGTGAGCTAAGATATCCTTCACTGTCTTCTCAAAAGCTAAGTTTGGCTTGGTCTCGTGAACTTGGAGAGTTTCAGTGCTATGATAAGTACATGCTTGCTTCTCTAAATGCCTCTGCAAGAAATATTGGAAAGCGTGAATGGGGAAATGGCGGTCCATTTGGCGCCGGAAGTTTGATGCAAAATCCCGAGCGTACTGAATTCTTTAGAAACGAGGGTGGCTCTTGGAATGTGCCATATGGTAAATTTTTCCTTGAATGGTACTCGGACTTGCTGCTACAGCATGGAGAGCGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGTACTGAAGTCCACATATCAGCAAAATTGGCAGCCATTCACTGGCACTATGATACACAATCCCATCCATCGGAGTTAACAGCAGGCTATTATAATACTTGTAACCGGGATGGATACTTACCAATTTTACGCATGTTTAGTAAATACGGATTCACAATGTGCTGCTCTTGTTTTGAAATGCAAGATGTAATTATGAAGAAGATCAACCCTGATAGTAGCCCTGAAGGTTTTCTTAGACAACTTTTGCTGGCTGCTAGGCTCTGTGACGTATCACTTGAAGGTCAAAATTTTTCAACTGATTTGGATGACGACGCATTCACTCAGGTGCTGGAGATGTCAAAATTTTACTCAAACGGGATTGAGAGACGCCCCTTCTCGTTCAACTTTGTAAGAATGGACAAAAATATGTTTGAACCCCGAAATTGGGACCGGTTTACTCGATTTGTGAGACGAATGTCCGATGGAAACATGTTTCGAGCCAGATTAAATTCTGTAGGAAACCTACGGTTGAAAACTACAGTGGCTGCAAAAGTTGGATTGTTATACCAGCTATACCAGTACTCTTGA 1665 0.4444 MAISSQSFPPSFISTPNDLTRPTRLPSRVTFTHFRKTQTRSSPLRFTVSSRLNSSKSSDAGGSLSPDNGDVQYELHHDLSPQRRRRGLPVFVTLPVKSVGKEGKIWRPKAMMLSLKALASAGVEGVVVEIWWGVVERNEPRVYDWRGYRELVMMACMCGLKVRAVLAFHQHGIDGDDLNGIPLPLWVLDEIHTDPDLAFSDRFGRRNIEYISLGCDILPVLRGRSPVQVYADFMRDFRDTFRPYLGIIITGVQIGMGPGGELRYPSLSSQKLSLAWSRELGEFQCYDKYMLASLNASARNIGKREWGNGGPFGAGSLMQNPERTEFFRNEGGSWNVPYGKFFLEWYSDLLLQHGERICREAETIFRGTEVHISAKLAAIHWHYDTQSHPSELTAGYYNTCNRDGYLPILRMFSKYGFTMCCSCFEMQDVIMKKINPDSSPEGFLRQLLLAARLCDVSLEGQNFSTDLDDDAFTQVLEMSKFYSNGIERRPFSFNFVRMDKNMFEPRNWDRFTRFVRRMSDGNMFRARLNSVGNLRLKTTVAAKVGLLYQLYQYS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05599 554 Pfam Glycosyl hydrolase family 14 91 514 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 MobiDBLite consensus disorder prediction 46 73 - -
Trre7g05599 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 165 186 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 370 386 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 143 161 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 257 279 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 405 428 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 398 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 122 136 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 334 353 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 MobiDBLite consensus disorder prediction 1 25 - -
Trre7g05599 554 MobiDBLite consensus disorder prediction 46 65 - -
Trre7g05599 554 Gene3D Glycosidases 80 544 - -
Trre7g05599 554 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 44 524 IPR001554 GO:0000272|GO:0016161
Trre7g05599 554 SUPERFAMILY (Trans)glycosidases 87 539 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05599 Trre-Chr7 61484935 61488452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05599 88 525 Glycoside Hydrolase AT4G17090 49.431 5.15e-153 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05599 K01177 - gmx:100805981 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05599 7 61484935 61488452 Trre7g05599 7 61484935 61488452 ECH