Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05596 ATGGTGTGGACATTATACGGTTTACCCATGGTGCACCCGGACAGCTTGCTTGTGGTAACCATCAATGGCTCAGGCTGTGTGGTCGAAATCATATATGTCACGCTCTTCTTGATTTACTCTAACCGCAACAAACGGCTCAAGGTCCTTCTATGGCTAGTTGTTGAACTCATTTTCATCGCAACTCTTACCTTCGTCACATTGAGACTTGTCCACACCGTCAAGAAACGTTCTGCAATTGTTGGTACCACTTGCATTATCTTCAACATTATGATGTATGCTGCACCTTTAGCTATCATGAAATTGGTGATCATGACTAAAAGCGTCGAGTACATGCCGCTTTCCATATCTCTTGCTTCCTTTGGAAATGGCGTTGCATGGACCACTTACGCTCTCATCGAATTCGACCCATTCATCACTGTACCAAATGGGATTGGAACATTGTTTTCTGTGGCGCAACTGATTCTATATGCTACCTATTACAAATCCACACAAATGCAGATAGCTGTTAGAAAAGCCAACAAAACAGAGGTGAACCTGTCTCAGGTTGTGGTTGGCAATAATGACCAACGATCCAAGACAAATCATTGA 588 0.432 MVWTLYGLPMVHPDSLLVVTINGSGCVVEIIYVTLFLIYSNRNKRLKVLLWLVVELIFIATLTFVTLRLVHTVKKRSAIVGTTCIIFNIMMYAAPLAIMKLVIMTKSVEYMPLSISLASFGNGVAWTTYALIEFDPFITVPNGIGTLFSVAQLILYATYYKSTQMQIAVRKANKTEVNLSQVVVGNNDQRSKTNH 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05596 195 Pfam Sugar efflux transporter for intercellular exchange 79 163 IPR004316 GO:0016020
Trre7g05596 195 Pfam Sugar efflux transporter for intercellular exchange 1 43 IPR004316 GO:0016020
Trre7g05596 195 FunFam Bidirectional sugar transporter SWEET 76 168 - -
Trre7g05596 195 Gene3D - 71 165 - -
Trre7g05596 195 PANTHER RAG1-ACTIVATING PROTEIN 1 1 172 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05596 Trre-Chr7 61456810 61457617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05596 1 195 Miscellaneous Gene Families AT4G10850 50.254 3.62e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05596 K15382 - gmx:100802303 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05596 7 61456810 61457617 Trre7g05596 7 61456810 61457617 ECH