Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05591 ATGGCATTCTCTTCACTCACTTCAATTCCTCTTTCATCTTCTTCTTCTCTTTACGCTCCTTCCATTTCTTCTCCATTTCGCGCATTTCCTCAATCAAACTTTCACCTAAAGAACAACAACAACTATTCCAACTTCTCCCTTAAAGCACAAACCCTAGACTTTACCGGTTCCTTCTTTGAAGGTGGATTAGGTTCTGATGATGATGATGATGAAGACGACGATGATATTGTTCTTCCAGGAACCGGGTTTGCTGATCTTGAAGAAAGAGAAGAACCGCAATGCCCACCCGGACTCAGACCTTACGAAACCATGGTGGTTTTGAGACCTGACATGTCTGAGGATGAGCGTCTTGCACTCACCCAGAAGTACGAAGAGCTTCTTGTTGCCGGAGGTGGCATGTATGTAGAGGTTTTTAACAGAGGTGTTATTCCACTAGCATATAGCATCCAGAAGAAAAACAAGGAAGGAGAGTCCAACACCTATATGGATGGCATCTACCTCCTATTCACATACTTCACGAAGCCCGAATCCATAACCGCTCTTGAGGATACACTATTGAGGGATGATAATGTTATCCGAACAACGAGCTTTAAAATCAGGAAAAGGAGATATTAG 615 0.4309 MAFSSLTSIPLSSSSSLYAPSISSPFRAFPQSNFHLKNNNNYSNFSLKAQTLDFTGSFFEGGLGSDDDDDEDDDDIVLPGTGFADLEEREEPQCPPGLRPYETMVVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIQKKNKEGESNTYMDGIYLLFTYFTKPESITALEDTLLRDDNVIRTTSFKIRKRRY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05591 204 Pfam Ribosomal protein S6 101 198 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Trre7g05591 204 SUPERFAMILY Ribosomal protein S6 98 201 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Trre7g05591 204 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 89 202 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Trre7g05591 204 FunFam 30S ribosomal protein S6 alpha, chloroplastic 97 204 - -
Trre7g05591 204 Gene3D - 97 203 IPR014717 -
Trre7g05591 204 Hamap 30S ribosomal protein S6 [rpsF]. 98 201 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05591 Trre-Chr7 61434997 61436868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05591 K02990 - gmx:100305490 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05591 7 61434997 61436868 Trre7g05591 7 61434997 61436868 ECH