Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05579 ATGGATGTTTTCTCTTCCTTCTCCCAACCTTTCATCCTCGCCGTTACTGTAACTTCCCTCTGTTTCTTCATCGCTCTCTTCTCGCTCCGGAGATTCACGCCGTCACGCAAACAACGCGCTTCTTCCGATTCCGACGCTGTTGTGCCCTACTTGAACGGTGGTGTTTCTGAAATGATGGAAATCAGTCAATCTCCGGCGCCGGTTGTGTTGGCTGATCGTCGTACTGGTTCTTCCATGATGGAGGAACTTGTTCCGGAGATTACAACGCACGCGCTTAGTTACTTGGATTATCCTAGCTTGTGTCGTCTTTCAATGACCAATTCTTTGATGCGAAAAGCTGCCAATGATGATAATGCCTGGAAAGCCCTCTATCACAAGGACTTCACTTTGGAACAAGATAGTGTTACACCAAGCAATGGGTGGAAGGCTTACTATGCTGCTACAAGAGCAATTGTGATTGTTAATACAGAATTCTTCAATATTGTTAGAGATAAGTCCATTTCGGCAATGAGACGTTTTTGGCTAAATGCAGATTATGTGAAGTGCATCCATGCTTCAGGAGAACTTTTTTCGGGGTATAATTCAGTAATGCAGAGCTGGCAACTCATATTCAACTGGGAGCAAGGATTGAACTTTCAGGTTCGGGATGTACGTGCTCGGGTCTTGACAGACATGGCTTGGGTTACCATGAAAACATATGTTGACATGGATACAGGGCCGTTCAATGTGACCAATGTCTTTGAGTTCCATGGTGGACGCTGGTATATGGTCCATCATCACATTTCTGTGATGAATGGGGATGTGGAGCAACAAAATATGCTTGGGTAA 828 0.4505 MDVFSSFSQPFILAVTVTSLCFFIALFSLRRFTPSRKQRASSDSDAVVPYLNGGVSEMMEISQSPAPVVLADRRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVTPSNGWKAYYAATRAIVIVNTEFFNIVRDKSISAMRRFWLNADYVKCIHASGELFSGYNSVMQSWQLIFNWEQGLNFQVRDVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHGGRWYMVHHHISVMNGDVEQQNMLG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05579 275 SUPERFAMILY F-box domain 76 258 IPR036047 GO:0005515
Trre7g05579 275 Gene3D - 70 148 - -
Trre7g05579 275 Pfam SnoaL-like domain 154 265 IPR037401 -
Trre7g05579 275 CDD F-box_FBXL4 81 126 - -
Trre7g05579 275 Gene3D - 149 272 - -
Trre7g05579 275 PANTHER F-BOX PROTEIN SKIP8 5 273 IPR044260 -
Trre7g05579 275 ProSiteProfiles F-box domain profile. 77 123 IPR001810 GO:0005515
Trre7g05579 275 SUPERFAMILY NTF2-like 146 264 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05579 Trre-Chr7 61365168 61368416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05579 - - cam:101493003 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05579 7 61365168 61368416 Trre7g05579 7 61365168 61368416 ECH