Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05565 ATGATTCTAAATATATCACCTCCTTCCTTCTCTCGCACACTTCCTCACCCTTCTTCAATTAAACTCTCTGAAACTTGTTCCAACCGCAACACCAACGCTTCTTATCCTCTTCTCATTTTCACAACTTCATCGTTTCCCAAACCTTCCAAATTCATCAACCTCAAAGCTTCCGTTAGCGAAAGCCAAAATGAAACTTCCAATTCCAACATATTTGATCAACAGTTTCTTCACCGACTTGCCGCCACCGCCAAAGACGCTGACGAGGCATTGCAGTTAATTTCCGATAACTCTTCCGCTAACGGCGGTGTTGTTTCTACTGCTGATTGTTGCTCTATTATTTCTGCTGCTCTTGATCGGAATAATCACCAACTTGCTTTGTCCATTTTTTATGCCATGCGCTCCACTTTTCATCAAGTTAGTGAGGATGGTCCTTTAGTTGAGAGATGGCAGTGGTCAAGGCCAAATGCAAGTGTTTATACATCGTTGATTCAGGGTTTGGCGGCATCTTTGAGGGTTTCGGATGCTCTTAGTGTGGTTAAATATATCTGTGAAGTGGGTGTCTCTCCTTCCGAGGAGGTTCCCTTTGGGAAGATAGTGAGGTGTCCTAGTTGTCAGATAGCTGTTGCAGTTGCACAGCCACAGCAAGGTATTCAGATAGTATCTTGTGCAAAGTGTCGCTACCAATACGAACTTGTTTCGGGAGACATAGTCAGCATTCAATCAGAAGAAATCAGCATGGACGTTACAGCATGGGAAAAGGGGTTAAGATTCCTGAAACTGATGAAACAAGGCATTCCTTCTGCTGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTATGGCCCGAACTCACAGATTTGCAACTGAGACAGTTGATCTACCAGCACAAGAAGGCGAAAGGGTAACTGTTGCTGTGGCAGCTCCATCAAATGTATATAGAAAGTTGGGGCCCTTTAAATTAAGTTCAAGATCCCCGGATTTATATCCTGGTGAGGCTATGTGCATAACAAACCACAAAGATGGACGGGAATCACGTCTTGTAAGAGCCCCTAGAAAAGATGAAAATTCATCATTACTAAAACCTTCCATCCTCTTTCCACTTATTGCTTTGTTTGCCACCGGTGATGCTGCCTCTGGACTTATTGACCCCAGCCTGCCTCAATTCCTATCAGTTGTTGCAGTTTCATCTCTTGCTGTTGGCTCTGCATTGAATTCCTTTGTTTTTCCCCGGTTTAATCAGCTTCCGCAAAGATCAGTGGAAGTAACTGCAATCAAACAACGTCTTTTATCTCAATATGACATGCTTCAGTCGCGCATCAATGGCCTAAAAGAAGCAGCTGAAAAAGAGGTTTGGATGTTAGCCCGGATGTGCCAACTTGAGAATAAAATTTCAGCTGTTGGAGAACCTTCTTATCGGAATCGGATAAGTAAAGTCAAAAGGGTCCGAGAGAGCCTGCAGAACTCCCTCCAGGGACGAATTGAACTGATTGCTAGCTATGCTAGGATTTCCTCAATGATTGAAATTGAAGTGGAGATGGAAACTGATGTTCTGGCTGCTGGAACTACTAGTGATGTGGATGGTTTCACTGAACAGATAGAGCAAATCATGGAGCTTGAAAATTTAGAGGAGAGATGGAAAATGCAAGCAGAAGCAAATGATGAAGCCGAAAGACTTCTTAGCTCCCAACCCATCCCTTTGGACGAAGTTTAA 1710 0.4368 MILNISPPSFSRTLPHPSSIKLSETCSNRNTNASYPLLIFTTSSFPKPSKFINLKASVSESQNETSNSNIFDQQFLHRLAATAKDADEALQLISDNSSANGGVVSTADCCSIISAALDRNNHQLALSIFYAMRSTFHQVSEDGPLVERWQWSRPNASVYTSLIQGLAASLRVSDALSVVKYICEVGVSPSEEVPFGKIVRCPSCQIAVAVAQPQQGIQIVSCAKCRYQYELVSGDIVSIQSEEISMDVTAWEKGLRFLKLMKQGIPSAVHSIVVQTPSGMARTHRFATETVDLPAQEGERVTVAVAAPSNVYRKLGPFKLSSRSPDLYPGEAMCITNHKDGRESRLVRAPRKDENSSLLKPSILFPLIALFATGDAASGLIDPSLPQFLSVVAVSSLAVGSALNSFVFPRFNQLPQRSVEVTAIKQRLLSQYDMLQSRINGLKEAAEKEVWMLARMCQLENKISAVGEPSYRNRISKVKRVRESLQNSLQGRIELIASYARISSMIEIEVEMETDVLAAGTTSDVDGFTEQIEQIMELENLEERWKMQAEANDEAERLLSSQPIPLDEV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05565 569 Gene3D Tetratricopeptide repeat domain 73 269 IPR011990 GO:0005515
Trre7g05565 569 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 11 567 - -
Trre7g05565 569 Coils Coil 538 558 - -
Trre7g05565 569 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 155 189 IPR002885 -
Trre7g05565 569 Coils Coil 425 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05565 Trre-Chr7 61244408 61249718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05565 - - gmx:100781803 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05565 7 61244408 61249718 Trre7g05565 7 61244408 61249718 ECH