Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05551 ATGAACACAGAAATCGAATTGCTTGAACTTTGCATAGACGCAGCTTGTAAAAGCAGAGAAACCGTTGAAAAATGGCGGTTACAGAGACGATCTCTCGATCGCTTACCTTCTCATCTCGCCGATGCTCTCCTCCGCCGCCTCATCACTCGCCGTCTCCTCCACCCCTCACTCCTCGAGGTTTTCAAACACAGTGCGGAAGAGGTTGATGTAAAAGGTGATAACTCTGTGGATGCAGAATGGATGGCATATTTGGGAGGATTTTGCCATTTGCGTTATTTGAACATTGCTGAGTGTCATCGAATCAATTCTTCAGCTCTTTGGCCAATCACAGGAATGAATAGCCTTAAAGAGTTGGATCTATCTAGATGCTCCAAAGTTAATGATGCTGGAATTAATCATATCCTTTCTGTTCCTAATTTGGAGAAGTTGCACATTTCAAAAACTAGCGTCACTGCCAAAGGAGTCAAGCTTCTAGCCTCTCTTAAAAGCTTGTCTCTTCTTGACTTGGGTGGTTTGCCTGTCGATGATGCATCTTTAGCTTCATTACAGGTACTGAAAAATCTACAACACATTGAACTCTGGGGTAGTAAAATATCAAACAAAGGTGCTGCTGTTCTTAACACATTCCCCAAGTTAACCCATCTAAATCTTGAATGGACCAGCGTCACAAAATTGCCTAATTTATCATCTCTTGAATGCCTCAACATGAGTAATTGTACTATTGACTCTATCCTTGAAGATGATAGAGCTCCTTTGACAAAGCTTATTTTCTCTGGGTCTACATTCCTGAATGAAGCTGGAACCTTATTATATGCAAATACAAATAACCTGTCCTTTCTGGACTTGGCCCATACCGGCCTTGACAAATTCTTCTTCTTAAGTAAAATGAAAGTAATAGAACATCTCAATCTCAGCTCATGTATGATGGATGATAATTCAGTTGAGATGGTTGCATGTATTGGTGGAAAGTTGAAAAGTTTGAATCTGAGTGGTACTTGGGTTAGCTCTGCTGGATTAGGGATTTTAGCTGGACATGTTCCCAATCTTGAAATTCTGTCACTATCTCAGACATCAGTGGATGATACTGCCCTCGGATTTATCAGCTTGATGCCTTTATTGAAGGTTGTTGATCTGAGCAATACAAACATTAAAGGGTTTTTGCACCAGGGAGGGACTGACTTGGACTCACTCTCTCTAACGGCCCTACAAAATCTGAAACAATTAGAAAGGCTGAATTTGGAGCACACTCAAGTCGCCGATGAAGCTTTATTCCCTTTATCAAGCTTCCAAGAGCTGAGATATTTATCTCTTAAAAGTCCTTCACTCTCAGACATCTCACTTTACCATCTATCATCAGTTCCTAAATTGACAGAGCTTAGTATCTGTGATGCGGTATTGACAAATTGTTCTCTTGATAAGGTTAAGGCCCCTGAAAGTCTGAAACTGATGGACCTCAGAGGTTGTTGGCTCTTAACCAAAGACGCTATCCTATCGTTCAGTAGAAATCATCCACGAATTGAAGTAAGGCATGAACTTGTTACGGTACTTCCTTTTGAAGAAAATGGACGTCAGCATTCATCTCCATCTCGATTAACTTCAAGGGCTATGCAAGCAGCTAGGAAGAAAGAACAAACGTCCTTATCTCCATATTTTGTAGATCAAAGGATGAAATATAGCAGAGATGAGTTACTTGCATTGCAGTTTATGTCTCTTCCTCTTGCATCAAATAGTGAGAGAGACAACTCAATACCTGATTAG 1758 0.4073 MNTEIELLELCIDAACKSRETVEKWRLQRRSLDRLPSHLADALLRRLITRRLLHPSLLEVFKHSAEEVDVKGDNSVDAEWMAYLGGFCHLRYLNIAECHRINSSALWPITGMNSLKELDLSRCSKVNDAGINHILSVPNLEKLHISKTSVTAKGVKLLASLKSLSLLDLGGLPVDDASLASLQVLKNLQHIELWGSKISNKGAAVLNTFPKLTHLNLEWTSVTKLPNLSSLECLNMSNCTIDSILEDDRAPLTKLIFSGSTFLNEAGTLLYANTNNLSFLDLAHTGLDKFFFLSKMKVIEHLNLSSCMMDDNSVEMVACIGGKLKSLNLSGTWVSSAGLGILAGHVPNLEILSLSQTSVDDTALGFISLMPLLKVVDLSNTNIKGFLHQGGTDLDSLSLTALQNLKQLERLNLEHTQVADEALFPLSSFQELRYLSLKSPSLSDISLYHLSSVPKLTELSICDAVLTNCSLDKVKAPESLKLMDLRGCWLLTKDAILSFSRNHPRIEVRHELVTVLPFEENGRQHSSPSRLTSRAMQAARKKEQTSLSPYFVDQRMKYSRDELLALQFMSLPLASNSERDNSIPD 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05551 585 ProSiteProfiles Leucine-rich repeat profile. 211 232 IPR001611 GO:0005515
Trre7g05551 585 Gene3D Ribonuclease Inhibitor 23 148 IPR032675 -
Trre7g05551 585 Pfam Leucine Rich repeat 113 131 IPR001611 GO:0005515
Trre7g05551 585 SUPERFAMILY RNI-like 108 473 - -
Trre7g05551 585 Gene3D Ribonuclease Inhibitor 149 255 IPR032675 -
Trre7g05551 585 Gene3D Ribonuclease Inhibitor 388 507 IPR032675 -
Trre7g05551 585 PANTHER - 341 541 - -
Trre7g05551 585 SMART LRR_CC_2 429 453 IPR006553 -
Trre7g05551 585 SMART LRR_CC_2 161 185 IPR006553 -
Trre7g05551 585 SMART LRR_CC_2 112 137 IPR006553 -
Trre7g05551 585 SMART LRR_CC_2 477 502 IPR006553 -
Trre7g05551 585 Gene3D Ribonuclease Inhibitor 270 387 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05551 Trre-Chr7 61176121 61179987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05551 - - gmx:100814174 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05551 7 61176121 61179987 Trre7g05551 7 61176121 61179987 ECH