Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05542 ATGGCAAATCCACCCAAAGAGATCAATCACCTCAACGATGACGACGCCGGAGCTGCTTTCGTCCTCCAATCCAAAGGTGAATGGTGGCACGCGGGGTTTCACTTAACAACGGCGATAGTGGGTCCCACAATACTAACGCTACCTTACGCATTCAAAGGTTTAGGATGGGGGATTGGGATGTTATGCCTAACAGTTATGGGTATTGTAACATTTTACTCTTATGGCCTTATGTCTAAAGTTCTTGATCATTGCGAACACTACGGTCGCCGCCACATCCGTTTCCGGGAACTTGCCGCCGATGTTTTAGGATCTGGATGGATGTTCTATTTTGTAATCTTTATCCAAACGGCAATCAATACTGGAGTTGGCGTAGGGGCAATCCTTCTTGCTGCTGAATGCCTTCAGATCGTGTACTCCAATGTTGCACCTCATGGATCACTGAAATTGTATGAGTTCGTAGCAATGGTGACAGTCGTAATGATAATTTTGTCTCAGCTTCCCACTTTCCATTCCCTGAGACACATCAACTTGTGTTCACTTTTTCTTAGCTTGGGCTACACCTTCCTAGTAGTTGGTGCTTGTATTCATGCAGGTACATCGAAAAATGCCCCTCCAAGGGACTATTCCTTAGAACCCAAGAAATCGTCAAGGGCCTTCAGTGCCTTTACTGCCATCTCCATAATTGCAGCAATTTTTGGGAATGGCATATTACCTGAGATACAAGCAACTCTAGCACCTCCTGCAGCTGGAAAGATGATAAAAGGCCTTACTATGTGTTATGCTGTAATTTTGGTTACGTTCTACTCTGCTGCAGTTTCTGGATATTGGGTATTTGGAAACAAAGCCAATTCAAACATTTTAAAGAGTTTGTTGCCAGATGATGGACCTTCTTTGGCTCCAACTTGGGTTCTTGGACTTGCTGTCATCTTCGTTCTACTTCAGCTCTTCGCAATTGGTCTGGTTTATTCTCAAGTTGCTTATGAAATAATGGAGAAGAAATCGGCTGACGTGAAGCAAGGGATATTTTCCAAAAGAAATCTTCTTCCACGCCTAATTCTTCGGACACTTTACATGATTTTCTGTGGATTTCTAGCAGCCATGTTACCATTTTTTGGAGACATAAACGGTGTGGTTGGTGCTGTTGGCTTTATTCCTCTGGATTTTGTTCTGCCTATGATTCTATATAATAAAACACACAAGCCTCCAAAATCATCATTGACTTATTGGATCAACCTCTCAATCATGGTGGTGTTCTCTGGTGCAGGAATCATAGGAGCATTCTCTTCTATTAGGAAATTGGTTCTTGATGCCAACCAATTTAAGCTGTTTGGCAGTGATGTTGTGGATTGA 1350 0.4281 MANPPKEINHLNDDDAGAAFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFKGLGWGIGMLCLTVMGIVTFYSYGLMSKVLDHCEHYGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAAECLQIVYSNVAPHGSLKLYEFVAMVTVVMIILSQLPTFHSLRHINLCSLFLSLGYTFLVVGACIHAGTSKNAPPRDYSLEPKKSSRAFSAFTAISIIAAIFGNGILPEIQATLAPPAAGKMIKGLTMCYAVILVTFYSAAVSGYWVFGNKANSNILKSLLPDDGPSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGIFSKRNLLPRLILRTLYMIFCGFLAAMLPFFGDINGVVGAVGFIPLDFVLPMILYNKTHKPPKSSLTYWINLSIMVVFSGAGIIGAFSSIRKLVLDANQFKLFGSDVVD 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05542 449 Pfam Transmembrane amino acid transporter protein 25 430 IPR013057 -
Trre7g05542 449 PANTHER OS05G0424000 PROTEIN-RELATED 27 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05542 Trre-Chr7 61109908 61114342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05542 1 449 Organic Solute Cotransporters AT5G41800 78.146 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05542 - - gmx:100815232 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05542 7 61109908 61114342 Trre7g05542 7 61109908 61114342 ECH