Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05523 ATGGACGCTTCCACTCTCTCCCGCATAGGCTTAGCTGGCCTCGCCGTCATGGGCCAAAACCTAGCCCTTAACATCGCCGAGAAAGGTTTCCCAATCTCCGTCTACAACCGCACTACTTCCAAAGTCGATGAAACCGTAGATCGGGCCCACCGTGAAGGCTCTCTTCCATTAACCGGCCAATACAGTCCTCGTGAATTCGTTCTCTCTCTTCAACGTCCTAGATCAGTCATTATCCTCGTCAAAGCCGGCGCTCCCGTCGATCAAACCATTGCTGCACTTTCCGATCATATGGAACCCGGTGACACCATCATCGACGGTGGTAACGAGTGGTACGAAAACACTGAACGAAGAATTCAACAAATTTCTGAAAAAGGTATTCTCTATCTCGGTATGGGAGTTTCCGGTGGTGAAGAAGGTGCGAGAAATGGACCTTCTCTTATGCCTGGTGGATCCTACCAAGCTTACAGCAATATTCAAGATATTCTCATGAAGGTTGCTGCTCAAGTTGAAGATGGTCCTTGTGTTACTTACATTGGTGAAGGAGGTTCTGGTAATTTTGTTAAAATGGTTCATAATGGTATTGAATATGGTGATATGCAACTTATTTCTGAAGCTTATGATGTATTGAAACATGTTGGTGGTTTATCGAATTCTGAACTTGCTGATATTTTTGCTGAGTGGAATAGTGGAGAATTAGAGAGTTTTCTTATTGAAATTACTGCTGATATTTTTAAGGTGAAGGATGAAGGTGGTGATGGTTATTTAGTGGATAAGATTTTGGATAAGACTGGTATGAAGGGTACTGGTAAATGGACAGTTCAACAAGCGGCTGAGTTATCGGTGGCCGCACCAACGATTGCGGCTTCGTTGGATTGTAGGTATTTGAGTGGGTTGAAGGATGAGAGGGAGAATGCGGCCGCAGTTTTGAAGGAAGCGGGGATGAGTGAGGATTTAGGAGGGTTTGTGAGAAGTGGGATTGATAAGAAACGGTTAATTGATGATGTGAGACAAGCTTTGTATGCTTCCAAGATTTGTAGTTATGCACAAGGTATGAATTTGTTGAGGGCAAAGAGTGATGAGAAAGGTTGGAATTTGAATTTCGGGGAATTAGCTAGGATTTGGAAAGGTGGGTGTATTATAAGAGCAGTGTTTCTGGATAGGATTAAGAAGGCTTATCAGAGGAACCCTAATTTGGCTAGTTTGATAGTGGATCCTGAGTTTGCTAAGGAAATGGTGCAGAGGCAAGGAGCATGGAGAAGAGTTGTGGGGTTGGCTATATCAGCTGGGATTAGTACTCCTGGAATGTGTGCTAGTCTTGCTTACTTTGATACATATAGGAGAGCAAGGCTTCCTGCTAACCTTGTTCAAGCTCAGAGGGACTTGTTTGGAGCTCATACCTATGAGCGACTCGATCGCCCCGGCGCATTTCACACGGAGTGGACGAAACTTGCTCGTCAGAGTGGTGCCGGTGTTCTTAATTGA 1482 0.4467 MDASTLSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVDRAHREGSLPLTGQYSPREFVLSLQRPRSVIILVKAGAPVDQTIAALSDHMEPGDTIIDGGNEWYENTERRIQQISEKGILYLGMGVSGGEEGARNGPSLMPGGSYQAYSNIQDILMKVAAQVEDGPCVTYIGEGGSGNFVKMVHNGIEYGDMQLISEAYDVLKHVGGLSNSELADIFAEWNSGELESFLIEITADIFKVKDEGGDGYLVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKDERENAAAVLKEAGMSEDLGGFVRSGIDKKRLIDDVRQALYASKICSYAQGMNLLRAKSDEKGWNLNFGELARIWKGGCIIRAVFLDRIKKAYQRNPNLASLIVDPEFAKEMVQRQGAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERLDRPGAFHTEWTKLARQSGAGVLN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05523 493 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 5 484 IPR006183 GO:0004616
Trre7g05523 493 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 182 482 IPR008927 -
Trre7g05523 493 Gene3D - 5 185 - -
Trre7g05523 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 181 IPR036291 -
Trre7g05523 493 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 449 482 - -
Trre7g05523 493 Gene3D - 449 482 - -
Trre7g05523 493 Gene3D - 186 448 IPR013328 GO:0016491
Trre7g05523 493 NCBIfam decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 9 481 IPR006113 GO:0004616|GO:0006098
Trre7g05523 493 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 186 448 - -
Trre7g05523 493 SMART 6PGD_2 184 481 IPR006114 GO:0004616|GO:0006098
Trre7g05523 493 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 5 185 - -
Trre7g05523 493 PIRSF 6PGD 1 488 IPR006113 GO:0004616|GO:0006098
Trre7g05523 493 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 8 179 IPR006115 GO:0050661
Trre7g05523 493 PRINTS 6-phosphogluconate dehydrogenase signature 173 201 IPR006183 GO:0004616
Trre7g05523 493 PRINTS 6-phosphogluconate dehydrogenase signature 370 392 IPR006183 GO:0004616
Trre7g05523 493 PRINTS 6-phosphogluconate dehydrogenase signature 72 101 IPR006183 GO:0004616
Trre7g05523 493 PRINTS 6-phosphogluconate dehydrogenase signature 7 30 IPR006183 GO:0004616
Trre7g05523 493 PRINTS 6-phosphogluconate dehydrogenase signature 125 150 IPR006183 GO:0004616
Trre7g05523 493 PRINTS 6-phosphogluconate dehydrogenase signature 255 282 IPR006183 GO:0004616
Trre7g05523 493 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 184 480 IPR006114 GO:0004616|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05523 Trre-Chr7 60979380 60980861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05523 K00033 - gmx:100803740 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05523 7 60979380 60980861 Trre7g05523 7 60979380 60980861 ECH