Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05518 ATGGGTGCCAAAGTTCCAATTTTCTTTGTTTTTGTAATGTTGTTTGCTTTAAGTTCAGCCAATCCAAGCAAGAGAAAGCAATACAAACCATGCAAAAACTTAGTCTTTTATTATCATGACATAAGTTACAATGGAAAGAATGCAGCTAATGCAACATCTTCAATAGTAGCAGCTCCACAAGGTTCCAATTTAACAAAATTGGCACCTCAATTCCACTTTGGTGACTTATTAGTTTTTGATGACCCAATCACATTGGATAACAACCTTCATTCAACACCAATTGGAAGAGCACAAGGCTTTTACCTTTATGATAGCAAAAAAAAATACACTTCTTGGTTTAGTTTTGCATTGGTTTTTAATGGCCCTCATCATGAAGGAACCATTACTTTAGCTGGTGCTGACCCATCGTCTATGACGAAAACTAGAGATATCACTGTGACTGGGGGCACCGGAGACTTCTTTATGCATAGAGGAATTGCTACTCTTAAAGGTGATGCTATTGAAGGTGATGTTTATTTTCGACTTCGTATTGAAGTTAAGTTCTTCGAGTGTTGGTAA 558 0.3692 MGAKVPIFFVFVMLFALSSANPSKRKQYKPCKNLVFYYHDISYNGKNAANATSSIVAAPQGSNLTKLAPQFHFGDLLVFDDPITLDNNLHSTPIGRAQGFYLYDSKKKYTSWFSFALVFNGPHHEGTITLAGADPSSMTKTRDITVTGGTGDFFMHRGIATLKGDAIEGDVYFRLRIEVKFFECW 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05518 185 Pfam Dirigent-like protein 31 179 IPR004265 -
Trre7g05518 185 PANTHER DIRIGENT PROTEIN 8 185 IPR004265 -
Trre7g05518 185 Gene3D - 16 179 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05518 Trre-Chr7 60934923 60935480 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05518 - - lja:Lj4g3v3002360.1 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05518 7 60934923 60935480 Trre7g05518 7 60934923 60935480 ECH