Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05505 ATGGCTCATACACAAAGAGAGCAATTCAAACCTGTAGAACCAAATTTCATATCATTAACCACTCATTTCAGCAGCCCAAGTGCAGATAATCAACACCAACACTTATCGGAACGCAAAACAAAACGGATCAAAACATGTGTAAGATGGTGTGGATGCATCACTGCAATTCTTTTGTTATTTATAGTTATACTCATAGTTCTAGCTTTTACTGTCTACAATGTAAAAGAACCTGAAGTTAGAATGAATGGTGTTACTCTTATCAGTGGAAATTTCAGCGGCACTTCGAATAACGTTACAATTTTTGCTGATATGTCTGTGAAGAATACAAATTCATTCACTTTCAGGTATGGAGTAGTTAATACTTCTGTTTTCTATAATGGAATTGAAATTGGAGAAGGAATAAATCCGCCAGGGAAAGCTAAGGCGCAAAGAACATCGAGGTTCAACGTGTCGTTGTCGATTAATCCACAAAAACTTGTGGATAATCAAGCATGGATTATAGATATAAGAGATCATCAAGGTTTGAATTTTAGCACCTATACAAGGATGAGTGGAAAGGTAAAAATATTGAATATGTTTAAGAGGAAAGTTGGGGTTGAGTTGAATTGTACTAGTCAATATAATGTCTCTTCTCTTGCAATCACACGTGGTGATAATTGTGTTGGCTATGTTAATATTTAG 681 0.3524 MAHTQREQFKPVEPNFISLTTHFSSPSADNQHQHLSERKTKRIKTCVRWCGCITAILLLFIVILIVLAFTVYNVKEPEVRMNGVTLISGNFSGTSNNVTIFADMSVKNTNSFTFRYGVVNTSVFYNGIEIGEGINPPGKAKAQRTSRFNVSLSINPQKLVDNQAWIIDIRDHQGLNFSTYTRMSGKVKILNMFKRKVGVELNCTSQYNVSSLAITRGDNCVGYVNI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05505 226 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 26 210 - -
Trre7g05505 226 SUPERFAMILY LEA14-like 57 165 - -
Trre7g05505 226 Pfam Late embryogenesis abundant protein 104 204 IPR004864 -
Trre7g05505 226 Gene3D - 63 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05505 Trre-Chr7 60802599 60803279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05505 23 133 EF-hand Containing Proteins AT5G21130 28.926 5.31e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05505 - - tpra:123915732 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05505 7 60802599 60803279 Trre7g05505 7 60802599 60803279 ECH