Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05497 ATGAAGTGCAAATCCGTTGCGTGCATATGGTCAGGCACACTCTTCCCTTCCGCTCATAAAGTTACCGCCGTCGCCGCTTTCACCCAACCACCGTCACCCGCCTTTTACACCGCCGGATCCGATGGCTCCATCATCTGGTGGTCACTTTCCACTTCCTCTCCCTCTCCGGAAGTTAAAGCGGTTGGAGTGTTGTGTGGTCATGCATCACCGGTCACTGATCTCGCTCTTTGTAGTCCAATTGCATCTGAAGAAAACGATATCGTTTCAAGTAGAAATAATTTCGGTGCTTTGATTAGTGCTTGTTCTGATGGTTTTTTGTGTGTGTGGAGTAAAAGTAGTGGACATTGTCGTTGCAGAAGGAAATTGCCACCTTGGGTTGGTACTCCTCTTGTAATTCGAACATTGCCTTCGACTCCGAGATATGTATGTATAGCTTGTTCTTTTGTGGATAATTATTCTGTTAATGATGAGTTAGGAGATAGAGAAAATCATCACAGGAGTAACTCTAAATCTACTATCCTTATTGTGGATACGTATTTGCTTTCCATTACTCAAACTGTTTTTCATGGAAATTTATCCATTGGTTCTATCAAGTTTATGTCACTAGTTTTTTCTGACGATGATGAGAAGAGGAATTCAGTGTTTATGGCCGATTCTTATGGGAAACAACAGATGGTTCCGATATCGGATGAGTCTCGTAATTGTGTGGAAAATTTGGTCAGTCCGCACAGTGACAAATCTCCATTGGGAAGTTCTTTTCCTGTGGAGGGATTCAGCGGTGTGGATGAAGTAATTTCAGTTTTAACGTTCGGGAACATTGTTGCTTTTATATTGAAAGATAGATGTATTTTTAGGCCATTGTCTAGCGATATCACGATTGGAGAGGTTTCTTTTGTGAACAACCTCTTCTTTTCGGATGGGAATTCCACTGAAGCTCATGCTATTGGTGGTGTTGTTCTTGAGAGTGATGATATGGGGAATACACCTGATACATATGAATGCAGCAACTTCATTCCAGTATATTTTGTTGTGTGGAATAATAGAGGTTATGCAATTACCTACGAAGTATCATATCAGAATGATGTTTTTCAGTGTGAACCCTATTCTGAGATTCCTGCTGGTCATTATCAATCTGATATAAGATTATCTATTTTTTTCCTACAAGTAAATCAAAATCTCGTGTGTATCAAGTCAGTTTGCTTTCATCACGAGGAACCTTTAATATGGAGACCACATATCACAATTTGGTCACTGCATCAATTTGATGATAAACCCGGAAAATTGTGCCGTCAGTGCAGAATGATCAATGACGGTGTATCTTCCACCAACTGGTTTGAGACGTCTACCAAACTCAATAGTCATGGTGATCTAGAGAGTAAATCAACGTTTGGCAGTGAAAGCATATGTAGTTATCTTCCTTACAAGGGGAAGATAGTTTCTTCTTCCATGATTGTCGCTGAGAACCTCTTTACACCTTATGCCATCGTATATGGATATTTTAGTGGAGAAATAGAGGTCATACGATTTGATCAGTTTCAAGGGATTTTCCTAGACGATGCAAGTTCCAATCATGATGAAATGTCAACTGCCCGCAAACAGAATTTCTCAGGACATACAGGTTCTGTACTTTGTTTGGCAGCACATCAAATGATGTGTAGTGCAAAAAGCTCCACTTTTAAACGGGTTTTGGTGTCTGGCAGTATGGATTGCACAGTTCGTATATGGGATCTTGACACTGGTAGTCTTATCAAGGTAATGCATCATCATGTCGCCGCTGTGCGTCAAATTATTCTTCCCCCATCAATAACAGGACATCCTTGGAGTGACTGCTTTCTTTCAGTGGGAGAGGATGCATGTGTTGCCCTTGTTTCTCTTGAGACTCTGCAGGTGGAAAGAATGCTTCCTGGACACATGAACTATCCCTCAAAAGTTTTATGGGATGGTGCAAGAGGTTATATTGCCTGTCTCTGTCAAACACATTACGGAACTTCCGATGGGGATGTATTATACATTTGGGATGTAAAGACAGGTTCTCGTGAGCGACTACTACGTGGGACAGCTGCACATTCAATGTTTGATCATTTTTGTAAAAATATCAGTATGAATTCTACACCTGGCTCTGCGCTGAATGGAAATACGTCAGTCTCTTCATTACTTCTTCCAATAGTTGATGACGCAAGGTTCTCTAACTCACCCTTAAGTCATACAGAGAACTTGCTTACTTCATCAAAGTCATCACCAAATATTTCAAGTATGAATGAGCTGAATTCTTCAAAACCAAATGTAGGTAAAGGAAATTCAGCAAAGCCAAATTCATCTTTGTTTGATCTTTTGAGTAACAACCTTCCTATCAAATGCTCTTGCCCGTTCCCTGGTATTGTGTCTCTGAGTTTTGATCTTGCGTCATTGATGTTCTCTTTTCAAAAGAATGAGTCCAAGAAAACTGGTGATGGCAAGCCAGTGAATATCAATTTGAAGCAGAAGGGTGTTCAGGAGCAAATTCCAAGCTACCATAATCCAGAAACATCAGAAGGGTGTGATTGGGTTAGCCTTTTTGAAGAATATTTACTGCGATACAGTTTGTCATTTTTACATTTGTGGAACGTAGACAGCGAGCTTGATAATTTGCTGATAAGTGATATGAAACTAAGGAGACCAGAAAATTTTATGATAGCTTCGGGTTTGCAGGGAGATAAAGGGTCATTGACATTGTCATTTCCTGGTCAGAGTGCTACTCTTGAGCTGTGGAAATCCTCATCTGAGTTTTCTGCAATGAGATCATTGACAATGGTATCCCTTGCTCAGCGTTTGATTAGCTTGTCTCACTCAAGTTCAGCTGCCAGCAGTGCATTAGCAGCATTCTATACCCGAAATTTCATGGAAAATTTTCCAGATATGAAGCCACCTTCGCTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGTATGGCTGCACGCTCTATATTTCACTGTGCTGCCTCTCATGCTATTCCCTTACCTCTATGCAATTCAAAATCTAATGAGTCAAATAATACAATCTCCCGAACTGGAAGTAGAGACAAACGCCAGGGAGATGCGACAGTAGAAAGCATATCACCTAATGCCAAAAAGCAAGGAATTTCCCAAGATGAGGAATCCAAGATACTTAATTGGCTAGAATCTTATGAAGTGCAAGATTGGATTTCTTGTGTTGGGGGAACAAGTCAAGATGCAATGACATCTCACATTATTGTTGCTGCTGCATTGGCTATCTGGTATCCTAGTCGTGTGAAACCTAGGCTTTCCATGTTAGTTGTTCATCCATTAATGAAGTTGGCTATGGCCATGAATGAGAAGTACAGCTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAGAGCACGTGGAAAGAATGCATGGTCTCTGAGATTCCTCATCTAATTGGGGACATTTTTTTCCAAGTAGAGTTGAGTGGTCCATCTTCCAAGTCAGTGACAGAAATTCCAGCTGCATCTTTTTCTATTAAACAGACTTTGGTGGAGGTTCTCCTTCCAAGTTTAGCGATGGCTGATATACCAGGATTTTTGGCAGTGATTGAAAGCCAAATTTGGTCAACTGCATCTGATTCACCTGTCCACTTGGTATCCTTGTTGACTCTCATAAGGATTATGCGTGGTTCTCCAAGATATTTGGCTCAGTACCTTGACAAGGTTGTCAACTTCATTTTACAGACTATAGATCCTAGCAACTCAGTTATGCGGAAGGCATGCTTCCAGAGTTCAATGACAACTTTCAAAGAAGTTGTACGCGTATATCCTATGGTTGCTGTCAATGAGTCTTGGACCAGACTCGCAGTTGGAGATGTGATTGGAGAAGTTAACAATGCAAGCATTAGGGTTTATGATATGCAAAGTGTGACAATGATAAAGGTTTTGGATGCAAGTGGGCCTCCTGGACTTCCAAGTTTGCTCACAGCAACGGATTCGGGAACAGTGTTAACTACTGCAATCTCAGCGCTAAGCTTTTCCCCAGATGGAGAGGGGCTGGTTGCTTTTTCAGAACATGGGCTCATGATTAGATGGTGGTCACTGGGATCTGTCTGGTGGGAGAAACTAAGCCGGAACTTCGTGCCGGTCCAGTGCACAAAACTAATATTTGTTCCTCCTTGGGAGGGATTCTCGCCTAATTCTTCCCGGTCAAGCATTATGGCCAATATTTTGGATACTGAAAAGCAGCTGAATTTGCAGGATAATGCGAAAGATTCAAATCATGGGGAGAGTTTGAAGCAATTGCTTCATAATCTGGACCTCTCTTATCGATTAGAATGGGTTGCTGAACGGAAAGTACTTCTTACAAGGCATGGTAGTGAATTGGGGACTTTTCAGTTGTAA 4383 0.415 MKCKSVACIWSGTLFPSAHKVTAVAAFTQPPSPAFYTAGSDGSIIWWSLSTSSPSPEVKAVGVLCGHASPVTDLALCSPIASEENDIVSSRNNFGALISACSDGFLCVWSKSSGHCRCRRKLPPWVGTPLVIRTLPSTPRYVCIACSFVDNYSVNDELGDRENHHRSNSKSTILIVDTYLLSITQTVFHGNLSIGSIKFMSLVFSDDDEKRNSVFMADSYGKQQMVPISDESRNCVENLVSPHSDKSPLGSSFPVEGFSGVDEVISVLTFGNIVAFILKDRCIFRPLSSDITIGEVSFVNNLFFSDGNSTEAHAIGGVVLESDDMGNTPDTYECSNFIPVYFVVWNNRGYAITYEVSYQNDVFQCEPYSEIPAGHYQSDIRLSIFFLQVNQNLVCIKSVCFHHEEPLIWRPHITIWSLHQFDDKPGKLCRQCRMINDGVSSTNWFETSTKLNSHGDLESKSTFGSESICSYLPYKGKIVSSSMIVAENLFTPYAIVYGYFSGEIEVIRFDQFQGIFLDDASSNHDEMSTARKQNFSGHTGSVLCLAAHQMMCSAKSSTFKRVLVSGSMDCTVRIWDLDTGSLIKVMHHHVAAVRQIILPPSITGHPWSDCFLSVGEDACVALVSLETLQVERMLPGHMNYPSKVLWDGARGYIACLCQTHYGTSDGDVLYIWDVKTGSRERLLRGTAAHSMFDHFCKNISMNSTPGSALNGNTSVSSLLLPIVDDARFSNSPLSHTENLLTSSKSSPNISSMNELNSSKPNVGKGNSAKPNSSLFDLLSNNLPIKCSCPFPGIVSLSFDLASLMFSFQKNESKKTGDGKPVNINLKQKGVQEQIPSYHNPETSEGCDWVSLFEEYLLRYSLSFLHLWNVDSELDNLLISDMKLRRPENFMIASGLQGDKGSLTLSFPGQSATLELWKSSSEFSAMRSLTMVSLAQRLISLSHSSSAASSALAAFYTRNFMENFPDMKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHAIPLPLCNSKSNESNNTISRTGSRDKRQGDATVESISPNAKKQGISQDEESKILNWLESYEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSRVKPRLSMLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECMVSEIPHLIGDIFFQVELSGPSSKSVTEIPAASFSIKQTLVEVLLPSLAMADIPGFLAVIESQIWSTASDSPVHLVSLLTLIRIMRGSPRYLAQYLDKVVNFILQTIDPSNSVMRKACFQSSMTTFKEVVRVYPMVAVNESWTRLAVGDVIGEVNNASIRVYDMQSVTMIKVLDASGPPGLPSLLTATDSGTVLTTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMANILDTEKQLNLQDNAKDSNHGESLKQLLHNLDLSYRLEWVAERKVLLTRHGSELGTFQL 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05497 1460 ProSitePatterns Trp-Asp (WD) repeats signature. 563 577 IPR019775 -
Trre7g05497 1460 MobiDBLite consensus disorder prediction 1031 1045 - -
Trre7g05497 1460 Gene3D - 485 795 IPR015943 GO:0005515
Trre7g05497 1460 ProSiteProfiles Trp-Asp (WD) repeats profile. 535 585 IPR001680 GO:0005515
Trre7g05497 1460 PANTHER RABCONNECTIN-3B, ISOFORM A 2 1460 - -
Trre7g05497 1460 SMART WD40_4 5 48 IPR001680 GO:0005515
Trre7g05497 1460 SMART WD40_4 528 576 IPR001680 GO:0005515
Trre7g05497 1460 SMART WD40_4 579 624 IPR001680 GO:0005515
Trre7g05497 1460 SMART WD40_4 627 673 IPR001680 GO:0005515
Trre7g05497 1460 SMART WD40_4 1326 1360 IPR001680 GO:0005515
Trre7g05497 1460 SMART WD40_4 57 110 IPR001680 GO:0005515
Trre7g05497 1460 Pfam WD domain, G-beta repeat 61 110 IPR001680 GO:0005515
Trre7g05497 1460 Pfam WD domain, G-beta repeat 534 576 IPR001680 GO:0005515
Trre7g05497 1460 Gene3D - 4 153 IPR015943 GO:0005515
Trre7g05497 1460 MobiDBLite consensus disorder prediction 1012 1045 - -
Trre7g05497 1460 SUPERFAMILY ARM repeat 933 1288 IPR016024 -
Trre7g05497 1460 SUPERFAMILY WD40 repeat-like 13 689 IPR036322 GO:0005515
Trre7g05497 1460 MobiDBLite consensus disorder prediction 736 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05497 Trre-Chr7 60717738 60726323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05497 K24738 - gmx:100818675 2245.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05497 7 60717738 60726323 Trre7g05497 7 60717738 60726323 ECH