Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05481 ATGAAAGATTCTGAGAAACTAATTTGGGAACAGATGAAGAGTTCTGCTAAATCTTGTGGTGGCACCCCCATTTCCAACGGAGGTGTAGTAGTAACACAATCTAAAACCTCTCATAAGCTTCTCGTTTTACTCATCCTCTTCGTTTCCGTAACCTACGTCCTTTACTCGCTCAAACTCGTTTCCACTTCACGCGCTTGCAAAGATTCACCATTCTCCACCGACATCACTCTCTCTTCTTCTTCTTCCTCTCTCCCAATCATCAATGCCACCGCCACAACAACAACCACAATAACCACCACCACCACCGACAAGCCAGAACTAACAGAACCGCCGACGGACCTCCGTCATGTGGTTTTCGGAATCGCCGCATCGGCGAAACTCTGGGAGCAAAGGAAAAACTACATTAAGCTATGGTACAGATCAAAGGACATGCGAGGTGTAGTGTGGTTAGACAGTAAAGTAAAAACGGAAAAAAATGAAAGTCTCCCGCCGGTGAGAATCTCCGGCGATACTTCAAAATTCGCTTATAAAAACAAACAAGGTCATCGCTCAGCGATAAGAATCTCGCGAATCGTATCTGAAACACTTCGTCTTGGAATGAAAGATGTACGGTGGTTTGTTATGGGTGATGACGACACCGTTTTCGTCACAGAGAATCTGGTGAGGATTCTTAGGAAATATGATCATAATCAATTTTATTATATTGGAAGTTTATCGGAGAGTCATTTGCAGAACATTTTCTTTTCTTATGGTATGGCTTATGGTGGTGGTGGATTTGCTATAAGCTATCCTTTGGCAAAAGCGCTTCACAAAATGCAGGATCGTTGTATTCAAAGATATCCTGGATTATATGGTTCAGATGATAGAATGCATGCTTGTATGGCTGAACTCGGTGTTCCACTCACTAAAGAAACCGGGTTTCACCAGTATGATGTGTATGGGAACCTATTAGGTCTTCTTGCGTCTCATCCGGTGACTCCATTAGTGTCGCTGCATCACCTTGACGTAGTTGAGCCAATCTTCCCCAATGTGACTCGCGTAGAAGCCCTCCAACGGCTTACTATACCAATGAAACTTGACTCAGCCGGGCTCATGCAGCAATCCATTTGCTACGACAAATCAAAGCGCTGGACCGTTTCTGTTTCATGGGGTTTCGTTGTTCAAATATTTCGAGGAGTGTTTTCACCACGAGAGATGGAAATGCCTTCAAGAACGTTCTTGAATTGGTACAGAAGAGCAGATTACACTGCATATGCATTCAATACGCGTCCCGTTAGTCGAAATCCATGCCAGAAGCCTTTTGTATTTTACTTCTCAAAAGCAAAATCCAATGATACAACCCAACAAACGCTGACTGAATACGAAAGGCACCGCGTCCCTCACCCAGAATGTCGATGGAAGATGGCCAATCCTTCTTCTATTGACAAAGTGGAGGTATATAAGAAGCCAGATCCGCATCTATGGGATAGAGCTCCAAGGAGAAACTGTTGCAGAGTTATGAAGTCGAAAAAGAAAGGAACCATGGTGATAGATGTGGGTATGTGTCAGGGGAATGAGGTAAGTGAAGCATAG 1572 0.4396 MKDSEKLIWEQMKSSAKSCGGTPISNGGVVVTQSKTSHKLLVLLILFVSVTYVLYSLKLVSTSRACKDSPFSTDITLSSSSSSLPIINATATTTTTITTTTTDKPELTEPPTDLRHVVFGIAASAKLWEQRKNYIKLWYRSKDMRGVVWLDSKVKTEKNESLPPVRISGDTSKFAYKNKQGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVTENLVRILRKYDHNQFYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALHKMQDRCIQRYPGLYGSDDRMHACMAELGVPLTKETGFHQYDVYGNLLGLLASHPVTPLVSLHHLDVVEPIFPNVTRVEALQRLTIPMKLDSAGLMQQSICYDKSKRWTVSVSWGFVVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKSNDTTQQTLTEYERHRVPHPECRWKMANPSSIDKVEVYKKPDPHLWDRAPRRNCCRVMKSKKKGTMVIDVGMCQGNEVSEA 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05481 523 Pfam Protein of unknown function, DUF604 244 497 IPR006740 -
Trre7g05481 523 FunFam Fringe-related protein-like 104 358 - -
Trre7g05481 523 Gene3D - 105 360 - -
Trre7g05481 523 PANTHER FRINGE-RELATED 37 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05481 Trre-Chr7 60583191 60586933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05481 4 516 Glycosyltransferase AT5G41460 68.966 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05481 - - gmx:100818244 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05481 7 60583191 60586933 Trre7g05481 7 60583191 60586933 ECH