Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05461 ATGGCACGTTTGGTTCTTCCATCCAAGACTCTGGCTTTTTCCAGGAAGAGTCTACTGAGTTTGATCTCACCTGCGCCTCTTCAGATTAGTTGCAGCGTTAATTGTTTTCGGAAGACCTCGAAAAGTAGTGTCAGATATAGACATTTTATTGCATCAGAGGTTGTTCTCCGAAAGAATTGTAGCCCGTTTAATTCTTTGGTACAGAGGGTCAAGAAAGCTAGTAGGAAGCTAATTTGTTCGGTTGCCACCGAACCAAAGCAATCTGAAGAATCTAAAATGGCGCAGCCAAGAGAAATATTCTTAAAGGATTACAAAAAGCCTGATTACTACTTTGAGACTGTGGATCTGAAATTTTCCTTAGGAGAGGAGAAGACAATAGTTAGTTCTAAAATTGCTGTGTTTCCTCGCGTTGAAGGTTCTGCTCCCCCGCTAGTTTTAGATGGACAAGACATGACTTTAGTTTCAGTTCAAATTAATGGCAAGGCCTTGAAGGAGGAAGACTATCATTTGGATGCACGCCATCTAACAATCAAATCACCTCCTAGTGGTAAATATGATCTTGAAATTGTTACCGAGATTCTCCCACAGAAAAACACATCATTGGAGGGACTTTACAAGTCATCCGGGAACTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATCACGTATTATCAGGATCGGCCTGATATAATGGCAAAGTATACCGTTCGCATTGAGGCAGACAAATCACTGTATCCAGTATTGTTGTCTAATGGAAACCTGGCTGGACAGGGTGACTTGGAGGGTGGCAAACATTATGCTGTTTGGGAAGATCCCTTCAAGAAACCTTGTTATCTGTTTGCCTTAGTCGCTGGGCAATTGGAGAGCAGAGATGACACATTCACTACCCGCTCAGGAAGGAAGGTAGCCCTTAGGATCTGGACGCCTGCAGATGACGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGATCTGGATCTCTTCAACATTGTTGCTGTCCCAGATTTTAATATGGGAGCCATGGAAAACAAAAGTTTGAATATTTTCAATTCCAAGCTTGTATTGGCTTCTCCAGAGACTGCTTCTGATGCAGATTATGCTGCAATATTAGGAGTTATTGGCCACGAGTATTTCCACAATTGGACTGGCAACAGAGTGACATGCCGCGACTGGTTCCAGCTTAGTCTGAAGGAAGGTCTCACAGTTTTTCGTGATCAGGAATTCTCGTCTGACATGGGAAGCCGTACTGTAGAGCGGATTGGCGATGTTTCAAAACTTAGGAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCAGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACAGTTTGTTCTTATGATCCTATGTATCAGGGGGCTGAAGTTGTTCGAATGTACAAAACCTTATTGGGAAGTCAAGGGTTCCGAAAGGGCATGGATCTTTATTTTAAGAGACATGATGGGCAAGCTGTAACATGTGAAGATTTTTTCGCTGCCATGCGAGATGCAAATAATGCAGATTTTGCAAATTTCCTATTGTGGTACTCTCAAGCTGGGACTCCTGTTGTTAAAGTAAATACTTCTTATAATGCAGAAGGACACACATTTACTTTGAAGATTAGTCAAGAGATACCACCAACTCCAGGGCAGTCCGTTAAGGAACCCATGTTCATTCCTATTGCAGTAGGTTTGCTTGATTCAACTGGCAAGGACATTCCTCTTTCTTCTATTTATCATGACGGGGCTTTGCAATCTGTTTCAAGCAATGACCAATCAGTCTCCACTACAGTCCTTAGAGTCACTAAGAAAGAAGAAGAGTTTGTATTCACTGATATCTTTGAGAGGCCTGTTCCATCTTTGTTAAGGGGATACAGTGCTCCTATTCGTCTTGAATCTGATGTCACTGATGATGACCTGTTTTTCCTATTAGCCAATGATTCTGATGAATTCAACCGATGGGAGGCTGGACAAATTTTGGCAAGAAAGTTGATGCTCAGCTTGGTGGATGATTTCCAACATAATAAACCCTTGGTTCTGAATTCCAATTTTCTTGATGGGTTCAGACGTATCCTATCTGACTCAAGTCTGGACAAAGAATTTGTGGCTAAGGCAATAACTCTGCCTGGTGAGGGAGAAATAATGGATTTGATGAAAATTGCAGACCCTGACGCTGTTCATACTGTTCGGTCTTTCATCAGGAAGCAGCTTGCAAGTGAACTGAGATCAGAATTCCTTAGCACAGTAGAAAATAATAGGAACTCAGGAGAATATGTGTTCGATCATTCAAACATGGCTAGACGAGCTTTGAAGAATGTTGCTCTTGCTTACCTTGCATCTCTCGAGGATCCAGAATTCACCAACCTTGCCCTTCAAGAATACAAAACTGCTACAAATATGACTGAGCAGTTTGCAGCATTGGCTTCAATAGCCCAGAATCCTGGTAAAACTCGTGATGATGTTCTTGCTGACTTTTATCAGAAGTGGCAAAATGATTACTTGGTGGTGAACAAATGGTTTGCTCTTCAAGCAGTGTCTGACATTGCTGGTAACGTTGAGAATGTGCGGAAACTGTTGAACCACCCAGCATTTGACTTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCTCCTGTGAACTTCCATGCAAAGGATGGCTCGGGCTACGAGTTTTTGGGCGATATTGTGCTGCAACTTGACAAAATAAATCCTCAGGTTGCCTCAAGAATGGTGTCGGCCTTCTCAAGATGGAAGCGTTATGATGACACCAGACAAAAACTTGCAAAGGCCCAGCTTGAGAAGATCATGTCTACTAATGGCCTATCAGAGAATGTGTTTGAAATTGCTTCAAAAAGCTTAGCTGCTTAA 2949 0.4252 MARLVLPSKTLAFSRKSLLSLISPAPLQISCSVNCFRKTSKSSVRYRHFIASEVVLRKNCSPFNSLVQRVKKASRKLICSVATEPKQSEESKMAQPREIFLKDYKKPDYYFETVDLKFSLGEEKTIVSSKIAVFPRVEGSAPPLVLDGQDMTLVSVQINGKALKEEDYHLDARHLTIKSPPSGKYDLEIVTEILPQKNTSLEGLYKSSGNFCTQCEAEGFRKITYYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAGQGDLEGGKHYAVWEDPFKKPCYLFALVAGQLESRDDTFTTRSGRKVALRIWTPADDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVERIGDVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVCSYDPMYQGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANNADFANFLLWYSQAGTPVVKVNTSYNAEGHTFTLKISQEIPPTPGQSVKEPMFIPIAVGLLDSTGKDIPLSSIYHDGALQSVSSNDQSVSTTVLRVTKKEEEFVFTDIFERPVPSLLRGYSAPIRLESDVTDDDLFFLLANDSDEFNRWEAGQILARKLMLSLVDDFQHNKPLVLNSNFLDGFRRILSDSSLDKEFVAKAITLPGEGEIMDLMKIADPDAVHTVRSFIRKQLASELRSEFLSTVENNRNSGEYVFDHSNMARRALKNVALAYLASLEDPEFTNLALQEYKTATNMTEQFAALASIAQNPGKTRDDVLADFYQKWQNDYLVVNKWFALQAVSDIAGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYEFLGDIVLQLDKINPQVASRMVSAFSRWKRYDDTRQKLAKAQLEKIMSTNGLSENVFEIASKSLAA 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05461 982 Gene3D - 291 374 - -
Trre7g05461 982 Pfam Peptidase family M1 domain 323 534 IPR014782 GO:0008237|GO:0008270
Trre7g05461 982 FunFam Aminopeptidase N 542 656 - -
Trre7g05461 982 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 299 549 - -
Trre7g05461 982 FunFam Aminopeptidase N 375 541 - -
Trre7g05461 982 Gene3D Neutral Protease Domain 2 375 541 IPR027268 -
Trre7g05461 982 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 95 287 IPR042097 -
Trre7g05461 982 Pfam Peptidase M1 N-terminal domain 107 281 IPR045357 -
Trre7g05461 982 NCBIfam aminopeptidase N 103 980 IPR012779 GO:0008270
Trre7g05461 982 FunFam Puromycin-sensitive aminopeptidase 657 981 - -
Trre7g05461 982 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 91 982 IPR012779 GO:0008270
Trre7g05461 982 Gene3D - 657 981 IPR037144 -
Trre7g05461 982 FunFam Putative aminopeptidase N 291 374 - -
Trre7g05461 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 389 404 IPR001930 GO:0006508
Trre7g05461 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 221 236 IPR001930 GO:0006508
Trre7g05461 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 353 363 IPR001930 GO:0006508
Trre7g05461 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 271 286 IPR001930 GO:0006508
Trre7g05461 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 408 420 IPR001930 GO:0006508
Trre7g05461 982 Pfam Domain of unknown function (DUF3458) Ig-like fold 542 655 IPR035414 -
Trre7g05461 982 Gene3D - 542 655 IPR038438 -
Trre7g05461 982 Gene3D tricorn interacting facor f3 domain 106 289 IPR042097 -
Trre7g05461 982 Pfam Domain of unknown function (DUF3458_C) ARM repeats 659 981 IPR024601 -
Trre7g05461 982 CDD M1_APN 103 539 - -
Trre7g05461 982 FunFam Aminopeptidase N 106 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05461 Trre-Chr7 60418227 60426350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05461 K01256 - gmx:100775476 1725.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05461 7 60418227 60426350 Trre7g05461 7 60418227 60426350 ECH