Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05457 ATGCCACCATTTGCAGGTTCTCATCCAAGTGGATTTGTAACATCCCAACCAAGAACAAATTCAAACATAGTTACAATCGATGTTGGTGGACAAATGTTTCAAACAACTAAACAAACATTAACCTCAGCAGGACCAAAAACTTTCTTCTCATCAATCTCACAAACTTCTTCACTTTTCACACCTTTCATTGACAGAGATCCTGAAATTTTCTCACTCCTTCTCTCTCTCCTCAGAACCGAACAATTAGAACCTTTTAATCTTCAAAAATCGCTTCAGTTACCATTAAACGGAAGAGATTCTCCTTCCGCCGTCGCAACTACCCCTTACGGTTCTCTTCATGTTGCACACGGTAGTAAGATCACTACGTTTGATTGGTCTCTTCGTCGGAAATCGACTGTTTTAACTCACTTCACCGCCGTTGATTCTCTTCTTGCTTTATCGCCGTCGCTTGCCGCCGCCGGTGCTAATGATTTCTCCGGTCTTCAGATTCTCGATTTGGAAAACGGTTACGTGAAGGATACATTAAATTGGGAAAACGTAACGAGATCTGGTTCTACTGTTCAAGCTATTGGATCTTCGCCGGAGCAAATGTTTGTAAGCTTTGAATCTTCTCGGAGAAACTCGAATTCGATCGTTGTTTATGATTTACATAGCTTGAGACCAGTAACAGAAATCGCACACAACGAGATCTATGGTGCCGATATCGATTCAGCGATTCCGGCGACGAAATTGCAGTGGATTGAAAGTCATAATCTGTTAATGGCGTCTGGTTCCCACAGCGGTCCTTCCGGCGTTTCCGGTAATATTAGGTTATGGGATGTTCGTTCCGGTAACATTGTTTGGGAGATATCTGAGAAAGTGGATTGTTTTGCTGACGTGGCAGTTTCTGATTCGTTGGATGCTATGTTCAAAGTTGGTGTGAATTCTGGTGAAGCGTTTTATATAGATATGAAGAATTTGAGTTCTGAGAAAAATTCATGGGTTTGTTTAGGTGATAAGAGAAAGGTTTTGAATGGGAAAAAAGAAGGGTTTGGTTGCAAAATTGAAACACAAGGGAATCAAGTTTTTTGTACTAAAGGTGGTGATGTTGAACTTTGGTCAGAGATTATAATGGGTTCTTCTAATAACAGGATTTTCAAGAAGAATTTTATGGGGAGAGTGCAAGATATGGGAGGTGCTAAGATTACTAATTTGGCCTTTGGTGGAAGTAGAATGTTCTTAACTAGAAAGGATTTGCAATGTGTTGAAGTTTGGCAGAGTTCTTCAAGGGAACTTTGA 1278 0.4053 MPPFAGSHPSGFVTSQPRTNSNIVTIDVGGQMFQTTKQTLTSAGPKTFFSSISQTSSLFTPFIDRDPEIFSLLLSLLRTEQLEPFNLQKSLQLPLNGRDSPSAVATTPYGSLHVAHGSKITTFDWSLRRKSTVLTHFTAVDSLLALSPSLAAAGANDFSGLQILDLENGYVKDTLNWENVTRSGSTVQAIGSSPEQMFVSFESSRRNSNSIVVYDLHSLRPVTEIAHNEIYGADIDSAIPATKLQWIESHNLLMASGSHSGPSGVSGNIRLWDVRSGNIVWEISEKVDCFADVAVSDSLDAMFKVGVNSGEAFYIDMKNLSSEKNSWVCLGDKRKVLNGKKEGFGCKIETQGNQVFCTKGGDVELWSEIIMGSSNNRIFKKNFMGRVQDMGGAKITNLAFGGSRMFLTRKDLQCVEVWQSSSREL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05457 425 Pfam BTB/POZ domain 24 82 IPR003131 GO:0051260
Trre7g05457 425 SUPERFAMILY POZ domain 21 82 IPR011333 -
Trre7g05457 425 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 174 422 IPR045068 -
Trre7g05457 425 Gene3D - 102 425 IPR015943 GO:0005515
Trre7g05457 425 Gene3D Potassium Channel Kv1.1; Chain A 12 89 IPR011333 -
Trre7g05457 425 SUPERFAMILY WD40 repeat-like 92 319 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05457 Trre-Chr7 60399056 60400438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05457 - - tpra:123915936 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05457 7 60399056 60400438 Trre7g05457 7 60399056 60400438 ECH