Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05446 ATGGCGTCAAAATCAGACCTAGTTCTCATCCTTGATTTTGGTTCTCAATACACTCATCTCATCACTCGTCGAATCCGAAGCCTCTCCGTTTTCTCTCTCTGTCTCAACGGAACCTCCTCTCTTCAATCCATCACCGAACTCAACCCCGCCGTAGTCATTCTCTCCGGTGGTCCCCACTCCGTCCACATCCCCGACTCCCCTTCCTTTCCCGACGGTTTCCTTCAATGGGCTCAGTCCAATGCCGTCCCTGTCCTTGGTATTTGCTATGGTCTCCAGCTTCTTGTTCACCGTCTCGGTGGCCAAGTCGGCGTCGGAAACAAGCAGGAATATGGCCGTATGGAAATTCATGTCGAGAATCCATCAGCTCTCTTCCCTGCCGAGAAAGTCGGACATAATCAAGTTGTTTGGATGAGTCATGGTGATGAAGCTATTACTCTTCCTGACGGTTTTAATGTCGTCGCGCGAAGCCAACAAGGTGCTGTTGCTGCCATAGAGAACCCCTCTGCCAAATTTTATGGCCTTCAGTATCATCCTGAGGTGACTCATACGCCTGAGGGAATAGAAACTCTAAAGCATTTTCTATTCGATGTTTGTGGAGTTGCAGCGGGATGGAAGATGGAAGATGTAATGGAAGAAGAAATCAAATTAATCAATAATACAGTGAGGCCTGATGAACATGTCATTTGTGCCTTATCTGGCGGTGTTGATTCCACCGTTGCTGCTACCATAGTTCACAAAGCAATTGGGGATAGGCTTCATTGTATTTTTGTTGACAATGGCTTGCTCAGGTATAAGGAGAGGGAACGTGTGATGGAAACCTTTGAAAAGGATCTTCATTTACCGGTTGTGTGCGTTGATGCTGTAGATCAATTTCTTACAAAGCTAAAAGGTGTAACTGATCCTGAAATAAAGAGGAAAATCATTGGTAAAGAGTTCATTTGCATCTTTGATGCTTTTGCTCAGGATCTAGAGAAGAAACTGGGAAGCCGTCCTGCTTACTTGGTGCAAGGAACCTTATACCCTGACGTGATTGAATCATGTCCACCACCTGGGAGTGGGAGAACTCATTCTCATACAATCAAGAGCCATCATAATGTTGGTGGTCTTCCAAAGGACATGAAATTAAAACTCATTGAACCACTTAAACTACTTTTTAAGGATGAGGTTCGTCAATTAGGGAGGATCATGGATGTTCCCGAGGGATTTCTAAAACGTCATCCCTTCCCTGGGCCTGGTCTTGCAGTTAGAGTTTTGGGTGATGTGACTGAAGGAAATGCCTTAGATGTTCTCCGTCAGGTTGATGAGATTTTCATTCAGTCAATCAAGGATGCTGGCCTTTATGATGTAATATGGCAAGCATTTGCAGTTTTCTTACCAGTAAGATCTGTTGGAGTTCAAGGTGATCAAAGAACACACTCCCATGTTGTTGCACTCAGAGCTGTTACAAGTCAAGATGGAATGACGGCAGACTGGTACTATTTTGAGCACAAGTTCCTTGATGACGTTTCACGCAAAATCTGTAATGGTGTCCGTGGTGTCAACCGCGTTGTGCAAGATATTACATCAAAGCCTCCATCAACAATTGAGTGGGAATGA 1596 0.4486 MASKSDLVLILDFGSQYTHLITRRIRSLSVFSLCLNGTSSLQSITELNPAVVILSGGPHSVHIPDSPSFPDGFLQWAQSNAVPVLGICYGLQLLVHRLGGQVGVGNKQEYGRMEIHVENPSALFPAEKVGHNQVVWMSHGDEAITLPDGFNVVARSQQGAVAAIENPSAKFYGLQYHPEVTHTPEGIETLKHFLFDVCGVAAGWKMEDVMEEEIKLINNTVRPDEHVICALSGGVDSTVAATIVHKAIGDRLHCIFVDNGLLRYKERERVMETFEKDLHLPVVCVDAVDQFLTKLKGVTDPEIKRKIIGKEFICIFDAFAQDLEKKLGSRPAYLVQGTLYPDVIESCPPPGSGRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGRIMDVPEGFLKRHPFPGPGLAVRVLGDVTEGNALDVLRQVDEIFIQSIKDAGLYDVIWQAFAVFLPVRSVGVQGDQRTHSHVVALRAVTSQDGMTADWYYFEHKFLDDVSRKICNGVRGVNRVVQDITSKPPSTIEWE 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05446 531 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 204 405 IPR025777 GO:0003921|GO:0005524
Trre7g05446 531 FunFam GMP synthase [glutamine-hydrolyzing] 416 531 - -
Trre7g05446 531 FunFam GMP synthase [glutamine-hydrolyzing] 205 415 - -
Trre7g05446 531 SUPERFAMILY GMP synthetase C-terminal dimerisation domain 410 531 - -
Trre7g05446 531 Gene3D - 2 201 IPR029062 -
Trre7g05446 531 Gene3D HUPs 205 415 IPR014729 -
Trre7g05446 531 Hamap GMP synthase [glutamine-hydrolyzing] [guaA]. 5 531 IPR022955 GO:0003922|GO:0006177
Trre7g05446 531 FunFam GMP synthase [glutamine-hydrolyzing] 5 202 - -
Trre7g05446 531 CDD GMP_synthase_C 226 530 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Trre7g05446 531 PRINTS Anthranilate synthase component II signature 173 186 - -
Trre7g05446 531 PRINTS Anthranilate synthase component II signature 83 94 - -
Trre7g05446 531 PRINTS Anthranilate synthase component II signature 52 61 - -
Trre7g05446 531 PRINTS Anthranilate synthase component II signature 8 22 - -
Trre7g05446 531 PANTHER GMP SYNTHASE-RELATED 6 531 - -
Trre7g05446 531 Pfam Glutamine amidotransferase class-I 10 196 IPR017926 -
Trre7g05446 531 Gene3D - 416 531 - -
Trre7g05446 531 NCBIfam glutamine-hydrolyzing GMP synthase, N-terminal domain 8 200 IPR004739 GO:0003922|GO:0005524|GO:0006177
Trre7g05446 531 NCBIfam glutamine-hydrolyzing GMP synthase, C-terminal domain 209 531 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Trre7g05446 531 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 193 425 - -
Trre7g05446 531 PRINTS Glutamine amidotransferase superfamily signature 52 61 - -
Trre7g05446 531 PRINTS Glutamine amidotransferase superfamily signature 83 94 - -
Trre7g05446 531 PRINTS Glutamine amidotransferase superfamily signature 173 186 - -
Trre7g05446 531 CDD GATase1_GMP_Synthase 8 194 IPR004739 GO:0003922|GO:0005524|GO:0006177
Trre7g05446 531 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 7 203 - -
Trre7g05446 531 Pfam GMP synthase C terminal domain 440 530 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Trre7g05446 531 SUPERFAMILY Class I glutamine amidotransferase-like 6 234 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05446 Trre-Chr7 60341233 60344384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05446 K01951 - gmx:100812448 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05446 7 60341233 60344384 Trre7g05446 7 60341233 60344384 ECH