Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05435 ATGGTTGATTCAATTGCTGCAACTTCAATTTTTTGCTACCGTCCTATTTGTGGTGGAAATTTGATTAGGGATGTATCTGGAAAGAGGAAATCTTTGAACACTTGTAGGTTTTCACCAGCTGAGTTTCTTGGTGGAAAGGTTGTTGTTTCATTGCCTTTGATTAAATCCAAACAAGATGGGTTCTTTTCGTCTTCGTCGATTAAGGCTCTTGCTGTTGAGCTTACAAGAGAAGCATTTGCTTATAGGGAAGACAAATTGCCAAAGAAAGGTAATACTAAGATTGATGGTGGTTTTGATCGTAAACCTGGTTTGTGGCCACCGGAAAATAGAGCGGATAAGCCTTCGCTTCGAAACCCTTTGCTTCGACAAGAGAGGATGGGATGTGGTTGGTTGGGTGCTATATTTGAGTGGGAGGGGGTTTTAATTGAAGATAATCCTGATTTAGAGAAGCAAGCTTGGCTTGCTCTTGCTCAAGAAGAAGGAAAACCCTCTCCTCCTGGTTTCTTAATCAAGAGAATCGAAGGTATGAAGAATGAACAAGCAATTTCTGAAGTGCTTTGTTGGTCTAGGGACCCGGCAGAGCTGAGAAGAATGGCTAATAGACAGGAAGAAATTTATCAAGCTTTACAAGGCGGGATATATAGTCTCAGACCTGGGTCCAAAGAGTTTGTCGGTGTTTTGATGCATTATAAGATACCGATGGCTTTGGTTTCTGCACGGCCTAGAAAAGTTATTGAGATTGCTATGGGGGAAATTGGTATTGAAGAAAATTTCAGTGTTGTTGTTACAGCAGAGGATGTTCACAGGGGGAAGCCTGATCCTGAAATGTTTGAGTATGCTGCCCAGCTTTTGAACTTCATACCTGAGAGGTGCATTGTGTTTGGAAACTCAAATTTAACAGTGGAGGCTGCACATGATGCACGGATGAAGTGTGTCGCTGTTGCTAGCAAGCATCCTGTGTATGAGCTTGGAGCTGCAGACATGGTTGTGAGGCGCTTGGATGAGCTTTCAGTGGTTGATTTGAAGAATTTAGCAGACATTGAAACATCTGAATTTGGGCCAGAGCCAGAGTTAGAGATGGAGTTGGAAAAAGATGATTTCTAA 1104 0.423 MVDSIAATSIFCYRPICGGNLIRDVSGKRKSLNTCRFSPAEFLGGKVVVSLPLIKSKQDGFFSSSSIKALAVELTREAFAYREDKLPKKGNTKIDGGFDRKPGLWPPENRADKPSLRNPLLRQERMGCGWLGAIFEWEGVLIEDNPDLEKQAWLALAQEEGKPSPPGFLIKRIEGMKNEQAISEVLCWSRDPAELRRMANRQEEIYQALQGGIYSLRPGSKEFVGVLMHYKIPMALVSARPRKVIEIAMGEIGIEENFSVVVTAEDVHRGKPDPEMFEYAAQLLNFIPERCIVFGNSNLTVEAAHDARMKCVAVASKHPVYELGAADMVVRRLDELSVVDLKNLADIETSEFGPEPELEMELEKDDF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05435 367 Pfam Haloacid dehalogenase-like hydrolase 147 314 IPR041492 -
Trre7g05435 367 CDD HAD_BPGM-like 193 316 - -
Trre7g05435 367 SUPERFAMILY HAD-like 133 336 IPR036412 -
Trre7g05435 367 Gene3D Putative phosphatase; domain 2 143 216 IPR023198 -
Trre7g05435 367 Gene3D - 133 331 IPR023214 -
Trre7g05435 367 NCBIfam HAD-IA family hydrolase 205 314 IPR006439 -
Trre7g05435 367 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05435 Trre-Chr7 60287493 60288596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05435 K22912 - gmx:100798181 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05435 7 60287493 60288596 Trre7g05435 7 60287493 60288596 ECH