Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05426 ATGCTTTCTACTTCAACTCGCTGCGTACTGTTGTTTACAAGATTACCTTTAGCTCTTCCTCTTTCTTCTTCTTCTTTTTCTTACAATAATAATCCAATCTTCTCATTCTCTTCTCTTCCAAACAAACCTATTACTATCATTCATAAACCTATTTTCACAACTCTAACCCCTTTGTCTTTCACTTTAAGAACAGATCACACCATGGCTTCTCAATCTAACCCCCAATCAATTCATGATTTCACCGTTAAGGATGCTAAGGGTAACGATGTTAATCTCGGTGACTACAAAGGAAAGGTCCTTCTTATTGTCAATGTTGCCTCACAATGTGGCCTGACCAACTCCAATTACACTGAGCTGACTCAGTTGTATGACAAATACAAATCAAAAGGTTTGGAAATTTTGGCATTCCCTTGCAATCAGTTTGGGGGACAAGAACCTGGATCTCTTGAAGAGATACAAAACACAGTGTGTACTCGCTTCAAAGCTGAGTTTCCCATCTTTGACAAGGTTGATGTGAATGGGAGCGATGCTGCTCCAATCTACAAGTATCTAAAGTCAAGCAAAGGTGGACTCTTTGGGGATGGTATCAAATGGAACTTCGCAAAGTTCCTTGTTGATAAAAATGGGAATGTTGTTGATCGTTATGCACCCACGACTTCTCCTCTGAGCATTGAGAAGGACTTGGTGAAGTTGCTTGCTGCATGA 705 0.4014 MLSTSTRCVLLFTRLPLALPLSSSSFSYNNNPIFSFSSLPNKPITIIHKPIFTTLTPLSFTLRTDHTMASQSNPQSIHDFTVKDAKGNDVNLGDYKGKVLLIVNVASQCGLTNSNYTELTQLYDKYKSKGLEILAFPCNQFGGQEPGSLEEIQNTVCTRFKAEFPIFDKVDVNGSDAAPIYKYLKSSKGGLFGDGIKWNFAKFLVDKNGNVVDRYAPTTSPLSIEKDLVKLLAA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05426 234 Pfam Glutathione peroxidase 77 185 IPR000889 GO:0004602|GO:0006979
Trre7g05426 234 ProSitePatterns Glutathione peroxidases active site. 97 112 IPR029759 -
Trre7g05426 234 CDD GSH_Peroxidase 76 228 IPR000889 GO:0004602|GO:0006979
Trre7g05426 234 Gene3D Glutaredoxin 68 233 - -
Trre7g05426 234 ProSitePatterns Glutathione peroxidases signature 2. 134 141 IPR029760 -
Trre7g05426 234 PRINTS Glutathione peroxidase family signature 95 112 IPR000889 GO:0004602|GO:0006979
Trre7g05426 234 PRINTS Glutathione peroxidase family signature 131 147 IPR000889 GO:0004602|GO:0006979
Trre7g05426 234 PRINTS Glutathione peroxidase family signature 196 205 IPR000889 GO:0004602|GO:0006979
Trre7g05426 234 PANTHER GLUTATHIONE PEROXIDASE 70 232 IPR000889 GO:0004602|GO:0006979
Trre7g05426 234 ProSiteProfiles Thioredoxin domain profile. 71 234 IPR013766 -
Trre7g05426 234 ProSiteProfiles Glutathione peroxidase profile. 67 234 IPR000889 GO:0004602|GO:0006979
Trre7g05426 234 FunFam Glutathione peroxidase 68 234 - -
Trre7g05426 234 SUPERFAMILY Thioredoxin-like 75 232 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05426 Trre-Chr7 60206266 60208702 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05426 K00432 - gmx:100306295 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05426 7 60206266 60208702 Trre7g05426 7 60206266 60208702 ECH