Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05421 ATGGAAGAAGAGGGAACATATGCTGCTGATATTTCATCTATAAAGGAAGCACATGCCAGAATAAAATCATTGGTTCTTAAAACTCCAGTTCTCTCTTCCGCCTCTCTCGATGCCATGTCAGGAAGGCAGCTGCACTTCAAGTGTGAAAATTTCCAAAAGGGTGGAGCTTTTAAATTTAGAGGTGCCTGCAATGCTGTTTTCTCTCTCAATGATGAAGAGGCTTCTAAAGGGGTTATAACACACAGCAGTGGAAACCATGCTGCTGCATTGGCTTTGGCAGCAAAACTAAGGGGGATCCCTGCGTACATTGTTATTCCAAAAAATGCACCAACATGCAAAGTTGAGAATGTAAAGCGGTATGGTGGTCAGGTTATCTGGTCTGAGGCCAATATGCGATCGAGGGAAGAAGTTGCGAATAAAGTGTGGCAAGAAACTGGTGCTATCTTTATACATCCGTATAATGATGGGCGCATACTAAGTGGCCAGGGTACTATATCCTTGGAGTTTCTGGAACAAGCCCCTCAAATAGATACACTTGTGGTGCCGATAAGTGGTGGCGGTTTGATATCAGGAGTAGCATTGGCTGCCAAGTCCATCAATCCGGCTATTCGTATTTTGGCTGCTGAACCTAAAGGAGCTGATGACGCAGCGCAATCTAAAGCAGCTGGAAGGATAATAACATTGCCTGAGACCAATACTATAGCCGACGGACTTCGAGCATTTCTCGGAGATTTCACATGGCCTGTTGTACGAGATCTTGTTGAGGACATAATAACTGTGGAGGACAGTGAAATTATTAAAGCCATGAAACTGTGTTTTGAAATTCTTAAGATTGTGGTAGAACCAAGTGGAGCAATTGGTCTTGCTGCTGTTCTATCCGAAACTTTTCAGAAAAATCCTGCTTGGAAAGATTGCAAACGTATAGGGATAGTAGTTTCAGGAGGCAATGTTGATATGGCTGTTCTTTGGGATTCTTTGAAAAAATGA 987 0.4306 MEEEGTYAADISSIKEAHARIKSLVLKTPVLSSASLDAMSGRQLHFKCENFQKGGAFKFRGACNAVFSLNDEEASKGVITHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKVENVKRYGGQVIWSEANMRSREEVANKVWQETGAIFIHPYNDGRILSGQGTISLEFLEQAPQIDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKIVVEPSGAIGLAAVLSETFQKNPAWKDCKRIGIVVSGGNVDMAVLWDSLKK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05421 328 Gene3D - 57 153 IPR036052 -
Trre7g05421 328 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 11 321 IPR036052 -
Trre7g05421 328 CDD Thr-dehyd 11 318 - -
Trre7g05421 328 FunFam L-threonine dehydratase catabolic TdcB 129 318 - -
Trre7g05421 328 Gene3D - 17 318 IPR036052 -
Trre7g05421 328 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 5 321 - -
Trre7g05421 328 Pfam Pyridoxal-phosphate dependent enzyme 25 314 IPR001926 -
Trre7g05421 328 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 IPR000634 GO:0006520|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05421 Trre-Chr7 60182469 60184467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05421 K12235 - gmx:100799758 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05421 7 60182469 60184467 Trre7g05421 7 60182469 60184467 ECH