Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05413 ATGCCAAAGATATATCCTAATCAAGAATCCACAACATCCTCTGATCAGTGTCTCAGCAATTGTAATAAAAGAGAAACATATACTGTATGGATGAAATCACTTGTTCTTCACTCAAATGGTTGTACTGTCTATAATTCAAACGGTAAAATCGTTTATCGAGTTGATAACTATGACAGAAAAGGTAGCAGAGAAATTAATCTAATGGATCTACAAGGTAATCTTCTTTGTACCATCAAAAAGAGATTATTAGCTTTTGGATGTTGGAAAGGACACAAATATTGCAGAAATTCTAATAGTAGAAATCAAGATCAACAATCATGGTTTGAAGTTAAAAGATGTAATAAGATTATCACAGGGAAAATAGCTTGTCAGATTAAAATGGGGTCCCAAAAATTATGCATAGAAAGAATGAGTATCGGAAAATCACTCGCTTTTCGGATAGTAAACAAATTAGATGGAAAAATCATTGCAGAGGCAAAGCAAAAACAATCATCTTCTGGAGTTGTTTTGAGCAATGATGTTCTAACTTTGAATTTGGCCGCCGGAACCGATCATTCCCTTATAATGGCTTTGATTACGGTCTACGGATTGATATGTGGTTTAATGTAG 609 0.3383 MPKIYPNQESTTSSDQCLSNCNKRETYTVWMKSLVLHSNGCTVYNSNGKIVYRVDNYDRKGSREINLMDLQGNLLCTIKKRLLAFGCWKGHKYCRNSNSRNQDQQSWFEVKRCNKIITGKIACQIKMGSQKLCIERMSIGKSLAFRIVNKLDGKIIAEAKQKQSSSGVVLSNDVLTLNLAAGTDHSLIMALITVYGLICGLM 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05413 202 Gene3D - 19 200 IPR038595 -
Trre7g05413 202 PANTHER - 25 199 IPR007612 -
Trre7g05413 202 Pfam LURP-one-related 23 194 IPR007612 -
Trre7g05413 202 SUPERFAMILY Tubby C-terminal domain-like 23 199 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05413 Trre-Chr7 60143005 60143613 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05413 - - tpra:123915970 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05413 7 60143005 60143613 Trre7g05413 7 60143005 60143613 ECH