Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre7g05394 | ATGTCACATTTTACAAGACTGTCGCCCTCGCCTTCGCAAGCACACTCCCCACCTCATCTCCCATCACCTGCTGCAAAGAGACAGAAACCAAAGCAGTCTACTGCACCCATGCAAAAGAATTTTGTTGCCGAAGAACTAGTTGAAAGCTTTGAATTGCCGGTTGTTAACAACTCAAGGAAAGGGCAAGATGTGAATGTGCCATCTGGAATAATGGTTTCTCCTGATACCTCAGGTAAATCCTTGAAAGTGGGTCGTCGGTTTTCACAGAGACTAGCTGGGGTTGAACCTGTCAATTTGGCTGACAATGTGACCAATGATCAGACTCTTCTGGTTCCAAAAAGAAATTTGAGAAAAAACAGAACCGCTCTAGCCGCTGATATGGAAAATAAATCACCTCAGCATTTCAACGGTACCCCAGAAATTGAGCAACCACAGGCAACAGACACAGGCAAGACACTTTCTGAAGTAGTTTTCAAAGAACAACCACGTCAGCTAGGAAGACATAAAACAGAAGAAAATAAGCCAGAATTTCATACCAACTCAAACAAATCCAGTAAGAAGAAAGAGCCCCACATTCCTTGTCGGGCGTCAAAACGACTGGCGGGATCTGAACCTGAGCTGATGAACTCCATATCCTGTGAAAAAACTTCCAAAAATAAAAGCAAAAGGTCCAAAGAAGTCATAGCTGAATTGCAGAGAAGTGAGGGTGCGCAAATTACCGAGCTTACAGATCATGCACCATTAAATGGAGAGTCAGGAAATAAAAGAATAAAATCTCCTAAAATCCTACCTGCCGCAGACAATCAACCAGAAAAATTTGAAGTGGATGACGAGAAATCAGAACCTCAGCTGTCCTTTGCATTTCACTACTCTTGGTCTGACCCATGTTTGGATTCTACAATCAATACCCTCACGGGTGTGTTACCACCAGTTGAGAATTCTGATGATATTGGACCCTCTACAGTCCCTGAAACTGATATTCAAAAACCTGCATTTGACATTGTCACCGGAAGAAGCAGGGGATGCCAAAAAAAATCAGTTGATAATGGACCCGCTACCGTCCAAGAAACTGATATTCAAAAAACTTCGTTTGACAACGTTACCAGAAGAAGCAAGGACAGTCAAAATAACTTGCTTGACAATGTTATAACAAGCAGGGACAAAAACCCACTGATGCCATCAAATAAATCCAAGAGAAAGAAAGAGGTCAAAGTCCCTATGCGGTTGTCGAAGCGACTTGCTGGCGTTGAACCGGAGGCAAGGCCTTCTGATAAAGCTCTTGAGTATTCCAGTAGAAAACCATGCAAAGGAAAACCCGCTGCAAATGTACTTTTAACTAATGGAACATCTGACCATCTTTATGGTAGTGAAGAATCCAAGCTTTTGAAAACAGAAGTGCTAAAAGAATCATCAAGGAAAAGTGGTAAGTTATATGATGCTCAAACTGTTCAGAAAGAACAACAATTAGAGAAAGTTGAAGCCAAAAATATTAGTGATGGTAAATCAAAGTCAGGGCTCACCTTGCCATTTGGGGAATCTTGGTCAGATCCATGCCTAGAATTTGCATTCAAGACTCTCACGGGTGCTTTGCCGGTTGATTCTGCTGCAGAGGTTTTTAAAGTAATGACTCCTGTTGTTGATAACCCGCCAAATAGTGAGTTTTATGGGAGAGTGACAACCAACATGAATGGAAAAACTCATGACAACTCAAATCAATCCCAGAACATGAAAGAGTGTAATATGGATGGCCAGTCTTCAAAGCTACTGCTTGGGCAACCAGAGTTGAGGACTAGCTCCACATCTGGAAAAAATGTGCCTGAATTTACCAATGGAGAATATCATAGTCATGAAGACAACATAATAAGGAATTTGGAACCTGTGTTGAGGACTAGCCCCTCTGGAAAAAATGTGCCTGGATGTACGAATGCAGAATCTCATAGTCATGAAGACAATATAATAAGGAATTTGGAACCTGTGTTGAGGACTAGCTCCATATCTGGCAAAGATGTGCCTAATTTTACCACCGGAGAATCTCATAGTCATGACAGCGACGACATATTTAGGAATTTGTTTGGAGAACCTCTATATGTTGAAGCTGAAAACTCTACCCAACTTCTGCATGATTCTAGAACTAATGCATGCTCACAAATACATGAAGAGCCATCAAAGAAAAATGACCAGGTTGCTGAGGGCGAATTATGTACATCGGTGCAACCACCACCTTTCCAAACTGAAACGTTAAACCATGACAATACTGAATTACAGTTCTGTGAGTCTTTTATGAATTCTTGGTCAGACCCATGCCTAGAATTTGCATTTAAGACTCTTACAGGTGTGATTCCAGTTGTGGACAATTCAGCAATTCAAGGGGGTATCCAGGAACCTGCTAACTGTCATGATGGAAGGGATGATGTATCAGCGTTGCCAGATTTTGGATCTTCCAGTTTTTCACAAAGTGATTTCTCATTTCACTTTGATACAGGAGTGAAGTCCACGCCAGGGCAGCAGTCATCAATGAGCTCTTCATTCCCGTCTCCGGGCCTGCAAGGTTGTCCAAGTGTTGATCCACAACAACAATATTCCCAGTTCAATAATAATTTTCAAAGAAGGAATATATTCAAAGAAATTTACGTACAAATGTTCCAACGCCACCACCTTCTGCTCAAATTTTTTGTTATTTCGCTCGCTCTTGCTAATTAA | 2700 | 0.4152 | MSHFTRLSPSPSQAHSPPHLPSPAAKRQKPKQSTAPMQKNFVAEELVESFELPVVNNSRKGQDVNVPSGIMVSPDTSGKSLKVGRRFSQRLAGVEPVNLADNVTNDQTLLVPKRNLRKNRTALAADMENKSPQHFNGTPEIEQPQATDTGKTLSEVVFKEQPRQLGRHKTEENKPEFHTNSNKSSKKKEPHIPCRASKRLAGSEPELMNSISCEKTSKNKSKRSKEVIAELQRSEGAQITELTDHAPLNGESGNKRIKSPKILPAADNQPEKFEVDDEKSEPQLSFAFHYSWSDPCLDSTINTLTGVLPPVENSDDIGPSTVPETDIQKPAFDIVTGRSRGCQKKSVDNGPATVQETDIQKTSFDNVTRRSKDSQNNLLDNVITSRDKNPLMPSNKSKRKKEVKVPMRLSKRLAGVEPEARPSDKALEYSSRKPCKGKPAANVLLTNGTSDHLYGSEESKLLKTEVLKESSRKSGKLYDAQTVQKEQQLEKVEAKNISDGKSKSGLTLPFGESWSDPCLEFAFKTLTGALPVDSAAEVFKVMTPVVDNPPNSEFYGRVTTNMNGKTHDNSNQSQNMKECNMDGQSSKLLLGQPELRTSSTSGKNVPEFTNGEYHSHEDNIIRNLEPVLRTSPSGKNVPGCTNAESHSHEDNIIRNLEPVLRTSSISGKDVPNFTTGESHSHDSDDIFRNLFGEPLYVEAENSTQLLHDSRTNACSQIHEEPSKKNDQVAEGELCTSVQPPPFQTETLNHDNTELQFCESFMNSWSDPCLEFAFKTLTGVIPVVDNSAIQGGIQEPANCHDGRDDVSALPDFGSSSFSQSDFSFHFDTGVKSTPGQQSSMSSSFPSPGLQGCPSVDPQQQYSQFNNNFQRRNIFKEIYVQMFQRHHLLLKFFVISLALAN | 899 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre7g05394 | 899 | PANTHER | OS04G0193200 PROTEIN | 254 | 379 | IPR038945 | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 414 | 432 | - | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 339 | 358 | - | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 162 | 258 | - | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 216 | 230 | - | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 628 | 647 | - | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 162 | 195 | - | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 342 | 358 | - | - | |
| Trre7g05394 | 899 | MobiDBLite | consensus disorder prediction | 414 | 434 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre7g05394 | Trre-Chr7 | 59993558 | 59998411 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre7g05394 | - | - | tpra:123915981 | 1341.25 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Trre7g05394 | 7 | 59993558 | 59998411 | Trre7g05394 | 7 | 59993558 | 59998411 | ECH |