Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05392 ATGTCTCTCATAAAAATAGCATTTTCTATGGCCACACCCAGCGGTGGAGGTCGTCAGTTGAACCAGGGCGAAACATGGTCCATAGACATCCCAGCTGGAACTTCATCAGGCCGAGTTTGGGGCCGAACCGGTTGCAGCTTCGACGGTTCAGGCCGTGGAAGTTGTCAGACTGGTGATTGCGGTGGCGCCCTAAGTTGTACCTTATCCGGTCAACCTCCACTCACCATTGCTGAATTCACACTTAATGCTTGGAACAATTTGGATTCTATAAACTTATCTGTGATTGATGGTTTCAATGTTCCAATGCAATTTAGTTCAACTTCTAATGGATGCAATGTAGTACTAAACTGCAGGGAATCTTCATGCCCTGATGCTTATCAAAATCCCAGTGAAAATTATAAAGTGCATTCATGCCCCGGTGGTACCAACTATAGAGTTGTATTTTGCCCTTGA 453 0.4525 MSLIKIAFSMATPSGGGRQLNQGETWSIDIPAGTSSGRVWGRTGCSFDGSGRGSCQTGDCGGALSCTLSGQPPLTIAEFTLNAWNNLDSINLSVIDGFNVPMQFSSTSNGCNVVLNCRESSCPDAYQNPSENYKVHSCPGGTNYRVVFCP 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05392 150 ProSiteProfiles Thaumatin family profile. 14 150 IPR001938 -
Trre7g05392 150 PANTHER OS03G0233200 PROTEIN 14 117 IPR001938 -
Trre7g05392 150 PIRSF PR5 6 120 IPR001938 -
Trre7g05392 150 PIRSF PR5 116 150 IPR001938 -
Trre7g05392 150 ProSitePatterns Thaumatin family signature. 51 66 IPR017949 -
Trre7g05392 150 SMART tha2 8 150 IPR001938 -
Trre7g05392 150 PRINTS Pathogenesis-related protein signature 38 49 IPR001938 -
Trre7g05392 150 PRINTS Pathogenesis-related protein signature 51 80 IPR001938 -
Trre7g05392 150 PRINTS Pathogenesis-related protein signature 140 149 IPR001938 -
Trre7g05392 150 PRINTS Pathogenesis-related protein signature 16 25 IPR001938 -
Trre7g05392 150 PRINTS Pathogenesis-related protein signature 88 104 IPR001938 -
Trre7g05392 150 CDD TLP-P 11 150 - -
Trre7g05392 150 Gene3D Thaumatin 3 150 IPR037176 -
Trre7g05392 150 Pfam Thaumatin family 12 117 IPR001938 -
Trre7g05392 150 SUPERFAMILY Osmotin, thaumatin-like protein 11 150 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05392 Trre-Chr7 59974073 59974602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05392 17 102 Receptor kinase-like Gene Family AT5G38280 45.455 1.32e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05392 - - psat:127102054 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05392 7 59974073 59974602 Trre7g05392 7 59974073 59974602 ECH