Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05382 ATGGGAGAGGAAGAAAAGAAAACAGAGGAAACCAAAGTAGAGGAGAAAAAAACAGAGGAACCAAAGAAAGAAGAAGAAAAGAAAGAAGCTGACAAACCCACCGAAGAGAAAAAACCGGAAGAATCTAAGGAACAAACTCCGCCACCGCCGCCAGAAATCGTGCTTAAAGTTTTCATGCATTGTGAAGGTTGTGCCCGCAAAGTTCGTCGTTCACTCAAAGGATTTCCAGGTGTTGAAGATGTAGTTACTGATTGCAAATCTCACAAGGTTGTTGTTAAAGGAGAAAAAGCGGATCCATTGAAGGTTCTAGAAAGAGTACAGAGAAAGAGTCATAGACAAGTTGAACTTCTTTCTCCCATCCCAAAACCACCTTCAGAAGAAGAGAAAAAAACTGAAGAAAAAGAAAAGCCTAAACCAGAAGAAGAGAAGAAAGAAGAGCCTAAGATTAGCATAATGGTTCTGAAAGTTCACATGCATTGTGAAGCTTGTTCACAGGAAATCAAAAGACGCATTGAGAAAATCAAAGGAGTGGAATCAGCAGAACCGGATCTGAAGAACTCACTAGTGACAGTGAAAGGAGTGATTGAGAGTGATAAATTAGTTGAATATGTATACAAGAGAACTGGAAAACAAGCAGTGATAGTGAAACAAGAGGAAGAGAAAAAAGAGGAAGCAAAAGAAACTAAAGAGGAAGAGAAAAAAACTGAGGAAAATGAAAAGGAAAAGAAAGGGAGTGGTGAAGGAGAGGAAAAGAAAGAAGCTGCTGCTGGTGGTGCTGCTGCTGGTGGTGCTGCTGCAGAGGGAGATGGAAAATCAATTGGTGGTGCAGAAGAAACCAAGGTGGTGGAATTGAAGATAAATGAATATCATTATAATTATAATCCACCAAGTATGGAGTTTTATGCTTATAATAATACTGGTCAACCTTACCCTCCACAGATGTTCAGTGATGAGAATCCAAATGCTTGTTCTGTTATGTAA 981 0.3945 MGEEEKKTEETKVEEKKTEEPKKEEEKKEADKPTEEKKPEESKEQTPPPPPEIVLKVFMHCEGCARKVRRSLKGFPGVEDVVTDCKSHKVVVKGEKADPLKVLERVQRKSHRQVELLSPIPKPPSEEEKKTEEKEKPKPEEEKKEEPKISIMVLKVHMHCEACSQEIKRRIEKIKGVESAEPDLKNSLVTVKGVIESDKLVEYVYKRTGKQAVIVKQEEEKKEEAKETKEEEKKTEENEKEKKGSGEGEEKKEAAAGGAAAGGAAAEGDGKSIGGAEETKVVELKINEYHYNYNPPSMEFYAYNNTGQPYPPQMFSDENPNACSVM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05382 326 MobiDBLite consensus disorder prediction 111 148 - -
Trre7g05382 326 Gene3D - 50 122 - -
Trre7g05382 326 CDD HMA 153 212 IPR006121 GO:0046872
Trre7g05382 326 MobiDBLite consensus disorder prediction 122 148 - -
Trre7g05382 326 CDD HMA 59 115 IPR006121 GO:0046872
Trre7g05382 326 Coils Coil 212 242 - -
Trre7g05382 326 MobiDBLite consensus disorder prediction 1 53 - -
Trre7g05382 326 ProSiteProfiles Heavy-metal-associated domain profile. 149 213 IPR006121 GO:0046872
Trre7g05382 326 Pfam Heavy-metal-associated domain 154 206 IPR006121 GO:0046872
Trre7g05382 326 Pfam Heavy-metal-associated domain 55 108 IPR006121 GO:0046872
Trre7g05382 326 MobiDBLite consensus disorder prediction 217 276 - -
Trre7g05382 326 Gene3D - 149 215 - -
Trre7g05382 326 SUPERFAMILY HMA, heavy metal-associated domain 151 214 IPR036163 GO:0046872
Trre7g05382 326 MobiDBLite consensus disorder prediction 1 45 - -
Trre7g05382 326 ProSiteProfiles Heavy-metal-associated domain profile. 50 114 IPR006121 GO:0046872
Trre7g05382 326 MobiDBLite consensus disorder prediction 217 254 - -
Trre7g05382 326 SUPERFAMILY HMA, heavy metal-associated domain 54 109 IPR036163 GO:0046872
Trre7g05382 326 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 36 326 IPR044577 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05382 Trre-Chr7 59893050 59894666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05382 - - pcin:129320935 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05382 7 59893050 59894666 Trre7g05382 7 59893050 59894666 ECH