Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05366 ATGCTCGTCTTGTCGTTGTGTGGAATTCCCCATCTAAGAAAATCCAAAGGTAAGATCATAGCCATAGCTTCCTCAGCTGGATGGTTGCCTGCTCCAAGAATGATGTTCTACAATGCAAGCAAAGCAGCAGTGATTAGCTTGTATGAGACTCTAAGAACTGAACTGGGAAAGGACATAGGAATAACTATAGTTACACCAGGGTTGATTGAATCAGAAATGACCCAAGGGAAGTTCCTATCTAAGGAAGGCCAAATGGTTCTTGACCAAGAAATGAGAGATGTTCAAGTTAGTGTGGTGCCCATAAGATCAGTCACAGAAGCTGCCAAAGGAATTGTGAATGGCGCTTGTCGTGGAGACTCTTACTTGACAGAACCAGCATGGATTAGGACTACCTTCTACTGGAAGGTGTTCTGCCCTGAAGTATTGGAGTTTTTAAACCGTTGGTTGCTACTATCAGGGTCTTCAGAGAGGGAAACAATTAGCAAGAAGCTCATAAATCTACCAGGCTTAAAGAAATATGTGTATCCTGAGTCAGTTAGAAATCCCAAGATCAAGCCCAACTAA 564 0.4273 MLVLSLCGIPHLRKSKGKIIAIASSAGWLPAPRMMFYNASKAAVISLYETLRTELGKDIGITIVTPGLIESEMTQGKFLSKEGQMVLDQEMRDVQVSVVPIRSVTEAAKGIVNGACRGDSYLTEPAWIRTTFYWKVFCPEVLEFLNRWLLLSGSSERETISKKLINLPGLKKYVYPESVRNPKIKPN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05366 187 Gene3D - 1 151 - -
Trre7g05366 187 Pfam short chain dehydrogenase 8 77 IPR002347 -
Trre7g05366 187 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 24 52 IPR020904 GO:0016491
Trre7g05366 187 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 149 IPR036291 -
Trre7g05366 187 PANTHER RETINOL DEHYDROGENASE-RELATED 9 153 - -
Trre7g05366 187 PRINTS Glucose/ribitol dehydrogenase family signature 11 27 IPR002347 -
Trre7g05366 187 PRINTS Glucose/ribitol dehydrogenase family signature 57 74 IPR002347 -
Trre7g05366 187 PRINTS Glucose/ribitol dehydrogenase family signature 37 56 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05366 Trre-Chr7 59748264 59749008 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05366 K22418 - lja:Lj4g3v2883360.1 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05366 7 59748264 59749008 Trre7g05366 7 59748264 59749008 ECH