Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05357 ATGGGGATTGATATGAATTCTGATGGTTCTGATCTTATTGCCTCTAAAGACGCCGCCGACGAAGCAGTTCAACCTCAGCCACAACCTCAAACAGTCACACATCAAACTGAAAACTCCACCAATTTTCCCTCACCGCCCGTCGAAATCTCCGACGATGACTTCATCGACATCTCCGATGACTTGGTTACTCCTCCACCTATTCCTGAACCACAACCTTCCGATTGTCCAGTCAACGATTTTCTTCGCCGCCTTGGATTTGGCTTGATGAGAGACTCGCTTGCTACTTGTCTTCGCGAACTAGGGGATTCGGTAAACGGCTTCCAAGGGTTTGATGTTGCTACAAAAGCTAAACTCTGTTTCGAGCAGTTTCTGTTTTCCGATCTCAATTTCTGTGGCTCTGCTGTTCTTCCTCCTAATGTCGAATCAATGCATCTCGATGTTCTCCCTGGTCCCTACGTATTGCAGGTTGATGAAATTCTCAATATCACTTGTCCTCTACGAAACAGATATCAAGAAGCTCCTCCAGGGCTTAAAAGGTGCTTGAAGTTGTCAATGACTGATGGTATTCAGAGAGTTTTTGGAATGGAGTATAGGCCTATTAAAGCTCTTGAAGTTTGTGCGTCTTCTGGTTTAAAGGTTGTAATCTCGAATGTACAAGTGCGTCGTGGACTTTTGATGCTGGTTCCTGAAACCATTGAAGTATTGGGAGGATTAGTTGAGCGGCTGGATGCAGCTCGAAAGCGGCTGGTTGACGAACTAAATAAGCCAGCAAGGGGAAACAGAACCAGAAATGGAGTGCTTCCTCCATTAGCAACCCGAGCGACTCTTGCTGCATGGCCTTCAAGTAGAGTTGATGATCTCGGTCACAGTGGCTCAATGTTGCCCAATACTGATACTGTCCAGGCAAACAACCAAGGTACCGGCCACAGCATTCCTGTCTCTGGTAATAACTTAACAACTGAATATACTCCGCGCATGAGTGCACAAAATGCTACTTCCAATTCAATACCCCACATGGTTTCAAACGTGGACCGAACGAATGTTGACATGCGGCGCCAGCAGGGTGCCAGCGTAACAACTGAATATACTTCGCGCATGGGTGCACAGAATGCTACTTCCAATTCAATACCCCACATGGTTTCAAACGAGGAGCGAATAAATATTGGTGTGCAACGCCAGCGGGGTGCCAACATAACAACTGAATATACTTCGCATATGGGTGCACAAAATGCTACTTCCAATTCAATACCTCACATGGTTTCAAACGTGGAGCGAATGAATATTGATATGCAACACCAGCAGGGTGCCAGAATAACAACTGAAGATGCTTCGCCTATGGATGCACAAATTGCTACTTCGAATTTAACACCTCACATGGCTTCAAATGTGGAGCCAATGAATATTGATATGCAGCAGGGTACCATTCCTGTGTCCCATAATAGTTCAATGGATAACCAGACTTCTTCAATAGCTGAGGAGATGCATATAGATACTGCTAATGTTAGCAGGGAAAACTCTGCTTGCAACCGATCTTCTCACATGAACTCAAATGTTGCAACGACCCATGAAGACACCATTCATGTAACAGGAGAAAGTTCCGTGACTATTGACTGTTCTCCTGTTTCTGAAAGAGTCGAGACAGACAGGAACAGAGTTCCTGTAATCACGGATAATACTCCTCTGAATGGATCTTCCTCCAGTGTTTTTAACTATGAAGATATCCTGATGGATGATGCCAGTGACAATCCGCTCATACTGTCTGGAGACCGAGAAGTTCCTTTCACATACTTAGCTAGTTTGTCAGCCAAGTGGGCTGTAATGAAGGAGACAGATCCTCTGGTTCGGGGTAAAATTAAGTGCTTTCTAACCGGTGTAAAAGGATTCCAGTTTAAGAAAAGAACAACCTACGAGCTTCAGGCATATATAGATGATGGTAGTCTTATTTCCGAAGTCCTTATTGATCATGATGTTGTACAGAAAGGAATTGGTTATTCTCCTGTCGAGGTCACTGCAGCTCTTTCTTCTTCTGACACTAATATAGCCCAGAACATGAAGGAGACTATGCGGAAATACCAAGCTTTCTTGGCAAACTTTGAGGGAGTAATACTTGTTGAATTAAATAGAAAATATTCCCTTCCACCTGCTCTAGAGATGAGTCAAGGCTGTCCTAAATCTGATGCTTGGTCCCTTTTGAGAAGGTTGAAGTCTCATCACTCTGCACAAGCTCAAAAACATTTCCCTTCAGACACAATTGTTTTATCCCCATAA 2268 0.4414 MGIDMNSDGSDLIASKDAADEAVQPQPQPQTVTHQTENSTNFPSPPVEISDDDFIDISDDLVTPPPIPEPQPSDCPVNDFLRRLGFGLMRDSLATCLRELGDSVNGFQGFDVATKAKLCFEQFLFSDLNFCGSAVLPPNVESMHLDVLPGPYVLQVDEILNITCPLRNRYQEAPPGLKRCLKLSMTDGIQRVFGMEYRPIKALEVCASSGLKVVISNVQVRRGLLMLVPETIEVLGGLVERLDAARKRLVDELNKPARGNRTRNGVLPPLATRATLAAWPSSRVDDLGHSGSMLPNTDTVQANNQGTGHSIPVSGNNLTTEYTPRMSAQNATSNSIPHMVSNVDRTNVDMRRQQGASVTTEYTSRMGAQNATSNSIPHMVSNEERINIGVQRQRGANITTEYTSHMGAQNATSNSIPHMVSNVERMNIDMQHQQGARITTEDASPMDAQIATSNLTPHMASNVEPMNIDMQQGTIPVSHNSSMDNQTSSIAEEMHIDTANVSRENSACNRSSHMNSNVATTHEDTIHVTGESSVTIDCSPVSERVETDRNRVPVITDNTPLNGSSSSVFNYEDILMDDASDNPLILSGDREVPFTYLASLSAKWAVMKETDPLVRGKIKCFLTGVKGFQFKKRTTYELQAYIDDGSLISEVLIDHDVVQKGIGYSPVEVTAALSSSDTNIAQNMKETMRKYQAFLANFEGVILVELNRKYSLPPALEMSQGCPKSDAWSLLRRLKSHHSAQAQKHFPSDTIVLSP 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05357 755 MobiDBLite consensus disorder prediction 24 46 - -
Trre7g05357 755 Gene3D - 127 253 IPR042470 -
Trre7g05357 755 Pfam RecQ mediated genome instability protein 93 248 IPR013894 -
Trre7g05357 755 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 73 736 - -
Trre7g05357 755 MobiDBLite consensus disorder prediction 1 50 - -
Trre7g05357 755 SMART DUF1767_2 78 171 IPR033472 -
Trre7g05357 755 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 593 734 IPR032199 GO:0000166
Trre7g05357 755 FunFam RecQ-mediated instability protein (DUF1767) 127 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05357 Trre-Chr7 59717208 59721602 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05357 K10990 - gmx:100803734 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05357 7 59717208 59721602 Trre7g05357 7 59717208 59721602 ECH