Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05308 ATGGATTCTGCCAGCATCACAGGTTCTGTTACACATATACCTATCAAAATGGCAATGGATTTTCATTTTAACAATAAATCACCAAGTTTGTTGCAATATTATTATAAACCCTTAAGGTTAAAGTGTTTATGTGTTACAAAAATGAATAATAATAACGTGGCAACAACTACAAGAACTATTCTGCATGATCTTTATGAGAAACAAAGACAAAGTCCTTACTATGATAATCTCTGTCGACCCATTTCAGATTTGGTTCCATTCATTGCCTCTGGAATCGAAGGTGTTACTACAAACCCTGCGATATTTGAAAAAGCTATATCATTATCAAATGCTTACAATCAACAGTTGAGGGAGTTAGTAGAGGGAGGGAAAGACACAGAAAGTGCCTACTGGGAATTGGTTGTGAAGGACATACATGATACTTGCAAACTCTTGGAACCAATTTACAATGAAACAAATGGGATAGATGGATATGTATCTGTTGCAGTTTCCCCCAAGCTTGCAAATGATACCAATGGAACAATTGAGGCAGCAAAATGGCTTCATAAAATGGTTGGATGTCCAAATGTTTATATCAAAATCCCTGCAATTGATGAATCCATTCCTTCAATTAAAGAAGTTATTTCACTTGGGATAAGTGTGAATGTCACCCTCATATTCTCTCTCCCTAGATATGAAGCTGTAATTAATGCTTACTTGGATGGTCTTGAAGCTTCTAGTATGAGTGATCTCTCTAAAGTTTCAAGTGCAGCAGCTTTCTACATCAGTAGAGTGGATGTTATAATTGACAAAAAACTTGAGCAGATTGGTACTGCCGAGGCTCTTGATCTCACAGGAAAGGCTGCGGTTGCTCAAGCAGCCTTGGCTTACCAGCTTTGCCAGAAAATGTTTTCTGGTCCAAGATGGGAGCGCCTGGAGAAGCGAGGTGCCAAGAAGCAAAGATTGATGTGGGCCTCAACAAATGTGAAAAATTCAGCTTACCCCGATACTTTTTATGTCGATTCTCTTATTGGACCTGATACGATTTCAACCATACCACCAAACCCTGCTCTTAAAGCATTCATGGACCATGGTATTCTTTCAAGAACCTTGGACGCAAAAGTATCAGAGGCACAACGCATATACAATGCAATTGAGACATTAGGGATTGATTGGAGTTCTGTCGGATCACAACTTGAAAACGAGGTGCTAACTTCTTTCACAAGAAGCTTCGACAACGTGCTTGGGTGTCTGAGTAAAAAGGTTAATGAATTCATAAGCCAATAG 1266 0.3894 MDSASITGSVTHIPIKMAMDFHFNNKSPSLLQYYYKPLRLKCLCVTKMNNNNVATTTRTILHDLYEKQRQSPYYDNLCRPISDLVPFIASGIEGVTTNPAIFEKAISLSNAYNQQLRELVEGGKDTESAYWELVVKDIHDTCKLLEPIYNETNGIDGYVSVAVSPKLANDTNGTIEAAKWLHKMVGCPNVYIKIPAIDESIPSIKEVISLGISVNVTLIFSLPRYEAVINAYLDGLEASSMSDLSKVSSAAAFYISRVDVIIDKKLEQIGTAEALDLTGKAAVAQAALAYQLCQKMFSGPRWERLEKRGAKKQRLMWASTNVKNSAYPDTFYVDSLIGPDTISTIPPNPALKAFMDHGILSRTLDAKVSEAQRIYNAIETLGIDWSSVGSQLENEVLTSFTRSFDNVLGCLSKKVNEFISQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05308 421 ProSitePatterns Transaldolase signature 1. 94 102 IPR018225 GO:0005975
Trre7g05308 421 PANTHER TRANSALDOLASE 77 414 IPR001585 GO:0005975
Trre7g05308 421 Gene3D Aldolase class I 59 416 IPR013785 -
Trre7g05308 421 Pfam Transaldolase/Fructose-6-phosphate aldolase 87 408 IPR001585 GO:0005975
Trre7g05308 421 Hamap Transaldolase [tal]. 61 421 IPR004732 GO:0004801|GO:0005737|GO:0006098
Trre7g05308 421 NCBIfam transaldolase 91 408 IPR004732 GO:0004801|GO:0005737|GO:0006098
Trre7g05308 421 SUPERFAMILY Aldolase 68 415 - -
Trre7g05308 421 PIRSF Trnald_Bac_Plnt 50 421 IPR004732 GO:0004801|GO:0005737|GO:0006098
Trre7g05308 421 CDD Transaldolase_like 71 405 IPR004732 GO:0004801|GO:0005737|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05308 Trre-Chr7 59321646 59324303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05308 K00616 - gmx:100811673 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05308 7 59321646 59324303 Trre7g05308 7 59321646 59324303 ECH