Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05293 ATGGAAGGACCTTCTCCAGATCTTCATCATCATGAATCAGATATAGAACTCATTGCCCCTGAAAACAGCACAAAGTTAAGCACTGCTGAGTCCAAAGCTAGCACAGATGTTAGTTATAACAAAGAAGAAGATGCAGACTATGTTGAAGTGACCATGGATATTCAAGGTGACTCTGTAGCCTTACACAGTGTGAAAACTATATCAGAAAGTGACATGGGAGAAGGGGATCATGAGAAACTGAGTTTGACTGGGAAGAGGTTGGAGAAGAAGAAATCATTTGGTGCTTCAGTTGTTCAGAATGCTACTATTCGTATAAAGCAGCTGAGGCGTTTGGCAACATTTTCGAAACCAGAAGCAAAACGATTGGAAAGGACTAAGTCTGCAGTGGCTCATGCTCTCACTGGACTCAAGTTTATCAGCTTGACTGATGTTGGTGCAGGGTGGTGTAAAGTTGAAAAAGAGTTTGAGAAGCTTACAGCCACCACTGATGGATATCTTCCTCGTGCTCTCTTTGTTAAATGCATAGGATTGAATGAGGAGTCTAAGGCATATGCAGAGAAGCTTTTTGATACTCTTGCTCGACAGAGAGGTATTCAAGGGGGTTCTATTAACAAGATCCAGTTTAAGGAGTTCTGGGACTGTATTTCTGATCAGAGCTTCGATACAAGGCTCAAAATATTCTTTGACATGGTTGACAAAGATGCAGATGGAAGAATCAACGAGGAAGAGATAAAAGATATTATATGCCTAAGCGCCACTGCCAACAAATTGTCAAACATCCAGAAACAAGCCGAGGAATATGCGGCTTTGATCATGGAAGAACTAGATCCAGATGACACAGGATATATATTGATAGGCAACCTGGAGACTCTCTTATTGCATGGACCAGAAGAAACTACAAGGGGAGAAAGTGCTGCTGAAACACTTAAATTGAACATGGCTATTATCTTATTGCCTGTTTGCCGAAACACCATCACTTGGCTCAGGAATAGGACCAAGCTAGGCGCTTTTGTTCCTTTTGATGATGGCCTCAACTTTCACAAGATGATAGCTGTGGCAATATCAATTGGTGTTGGAATACATGCTATTTATCATCTTGAATGGTATAAGAAAACGACTTGGATGTATCTGGCTATTCCCATCACCATTTATGCATTGGAAAGGCTTATTAGAGCTCTTAGATCGAGCATCAAGTCTGTGAAAATATTGAAGGTGGCTGTCTATCCTGGTAATGTGTTGGCAATTCATATGTCAAAACCTCAAGGGTTCAGCTATAAGAGTGGACAATACATGCTTGTCAATTGTGCTGCTGTGTCTCCACTAGAATGGCATCCATTTTCTATAACTTCCGCCCCTAATGATGATTACCTTAGTGTTCACATTAAAATACTTGGTGATTGGACTCGAGGTCTGAAAGCTAAATTCTCACAGGCGTGCCAGCCAGCCATCAATGGACAGAGTGGACTTCTAAGAGCAGAATGCATGAAAGGAGATAACAGCCCAAGTACTTTCCCTAAAGTTCTGATTGATGGTCCCTATGGAGCGCCAGCACAAGACTACAGGGAGTATGAGGTGGTTTTACTTGTGGGGCTGGGAATAGGAGCTACCCCAATGATAAGTATACTAAAGGACATGGTCAATAATTTCAAGGCCATGGAAGTAGAAGATGGGTTCGCAATGGAGGAAGGATCACCGGTGACAACCAACCAGAAAGACACTAGGTTCAGTGACTTCAAGACAAGGAGGGCATACTTCTATTGGGTGACAAGAGAGCAAGGTTCCTTTGATTGGTTTAAAGGGGTGATGAATGAGGTAGCTGAGGAAGACAGAAGGGGATTGATTGAGCTACACAGCTACTGCACCAGTGTCTACGAACAGGGTGATGCTCGCTCTGCTCTTATTGCCATGGTGCAGTCTATTAACCATGCAAAGAATGGCGTGGACATTGTCTCCGGTACTCGTGTCAAGTCTCACTTTGCCAAACCCAATTGGCGAACTGTCTACAAAAGAATTGCTCTTAATCATCCGGCAGCACGAGTTGGGGTATTTTACTGTGGGCCATCTACCCTGACCCACGAGCTACGTCAGTTGTCATTGGATTTCTCACATAATACATCCACTAAATACGACTTTCATAAAGAAAATTTCTGA 2151 0.4277 MEGPSPDLHHHESDIELIAPENSTKLSTAESKASTDVSYNKEEDADYVEVTMDIQGDSVALHSVKTISESDMGEGDHEKLSLTGKRLEKKKSFGASVVQNATIRIKQLRRLATFSKPEAKRLERTKSAVAHALTGLKFISLTDVGAGWCKVEKEFEKLTATTDGYLPRALFVKCIGLNEESKAYAEKLFDTLARQRGIQGGSINKIQFKEFWDCISDQSFDTRLKIFFDMVDKDADGRINEEEIKDIICLSATANKLSNIQKQAEEYAALIMEELDPDDTGYILIGNLETLLLHGPEETTRGESAAETLKLNMAIILLPVCRNTITWLRNRTKLGAFVPFDDGLNFHKMIAVAISIGVGIHAIYHLEWYKKTTWMYLAIPITIYALERLIRALRSSIKSVKILKVAVYPGNVLAIHMSKPQGFSYKSGQYMLVNCAAVSPLEWHPFSITSAPNDDYLSVHIKILGDWTRGLKAKFSQACQPAINGQSGLLRAECMKGDNSPSTFPKVLIDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVNNFKAMEVEDGFAMEEGSPVTTNQKDTRFSDFKTRRAYFYWVTREQGSFDWFKGVMNEVAEEDRRGLIELHSYCTSVYEQGDARSALIAMVQSINHAKNGVDIVSGTRVKSHFAKPNWRTVYKRIALNHPAARVGVFYCGPSTLTHELRQLSLDFSHNTSTKYDFHKENF 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05293 716 CDD NOX_Duox_like_FAD_NADP 402 716 - -
Trre7g05293 716 PANTHER NADPH OXIDASE 369 716 - -
Trre7g05293 716 Pfam Respiratory burst NADPH oxidase 121 222 IPR013623 GO:0004601|GO:0050664
Trre7g05293 716 ProSitePatterns EF-hand calcium-binding domain. 232 244 IPR018247 -
Trre7g05293 716 ProSiteProfiles EF-hand calcium-binding domain profile. 219 254 IPR002048 GO:0005509
Trre7g05293 716 SUPERFAMILY Riboflavin synthase domain-like 399 515 IPR017938 -
Trre7g05293 716 Pfam FAD-binding domain 398 516 IPR013112 GO:0016491
Trre7g05293 716 Gene3D - 514 716 IPR039261 -
Trre7g05293 716 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 521 716 IPR039261 -
Trre7g05293 716 FunFam Respiratory burst oxidase protein A 514 716 - -
Trre7g05293 716 MobiDBLite consensus disorder prediction 20 35 - -
Trre7g05293 716 SUPERFAMILY EF-hand 150 294 IPR011992 -
Trre7g05293 716 Pfam Ferric reductase NAD binding domain 523 698 IPR013121 GO:0016491
Trre7g05293 716 MobiDBLite consensus disorder prediction 1 18 - -
Trre7g05293 716 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 395 519 IPR017927 GO:0016491
Trre7g05293 716 Gene3D - 122 240 - -
Trre7g05293 716 FunFam Respiratory burst oxidase homolog A 386 478 - -
Trre7g05293 716 Gene3D Translation factors 385 487 - -
Trre7g05293 716 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05293 Trre-Chr7 59229906 59236030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05293 349 716 Miscellaneous Gene Families AT5G51060 69.022 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05293 K13447 - gmx:100808271 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05293 7 59229906 59236030 Trre7g05293 7 59229906 59236030 ECH