Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05215 ATGCTGCTGCACCTCCGCAACCGTCTTCCTCGCTCTACTCCTTCTTCCTCCTCCTCCGGGAACGCATTATTTTTCCTTGGTCATCATCATCATCATCATCATGTAAACAACTGGAAAAGTAGTTTTCAATTGGAAAAAACTATTAGATTCTTACACAACAATCAAAAGAGACAAAAGAAGATCCATTCTTCTCTACCTTCTATTGATCAATTGAATAATGCTCGTGTTATATATTCTGTTGCTCCATCCATGGGCCACAACCAGGAGGATCATCCAGAATCACATTTTAGAGTTCCTGCAATTGTGAATGCTTTGGGAGAAATGAAACTCACTTCAAAGTTTCGTGGCTCTGAGGTCGTTAAACTTCAACATTTTGAGCCTGCTTCAACCGATGACATTGCAAGTGTGCATGCAAGAGACTATGTTTCTGGGCTTGAAAAGGCTATGGATCAAGCTTTGGAAAATGGCAGCCATTCAAAAAAAAATAAAAAAGCTTTGGAAAAGGGCCTTATTGTTATTGAAAAATCTGGACCAACATATGCTACTTCTACTACCTTCCGGGAGTCAATAGTAGCAGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCTTCAAAGATAAACAAAGATCCACCTACTGGTTTTGCTTTGATAAGACCACCAGGACATCATGCTGTTCCACAAGGACCTATGGGCTTCTGCATCTTTGGAAATGTGGCCATTGCGGCTCGTCATGCTCAACTTGTTCATGGACTGAAGCGTGTGTTTATAATTGACTTTGATGTTCACCATGGAAATGGAACAAATGATGCTTTCTACAATGATCCAGATGTATTTTTCCTTTCCTTCCACCAAGATGGAAGCTATCCAGGTACAGGAAAGTTTGATGAGGTAGGTGCTGGGGATGGTGAAGGAACCACACTGAATCTGCCTCTTCCTGGAGGTTCTGGTGATACTACTATTAGAACTGTGTTCGATGAAGTTATTGTACCTTGTGCTCAAAGATTTAAGCCAGACATCATTCTTGTTTCTGCTGGGTATGACGGCCACGTGTTGGATTCTATAGCTAATCTTCAATTAACAACGGGAACATATTACATGCTTGCATCCAATATTAAGCAACTAGCAAAAGACTTGTGTGGGGGTCGATGCGTATTTTTCTTGGAAGGAGGATATAATCTCAAGTCTCTTTCATACTCAGTGGCAGACACATTTCGTGCTCTTCTTGGGGACAAAAGCTTGGCATCTGAGTTTGATAACCCAAACATTTTGTGCGAAGAGCCAACAAAAAAGGTTAAGCAAGCAATTCATAGGATAAAATGCATTCATTCCTTATGA 1344 0.4115 MLLHLRNRLPRSTPSSSSSGNALFFLGHHHHHHHVNNWKSSFQLEKTIRFLHNNQKRQKKIHSSLPSIDQLNNARVIYSVAPSMGHNQEDHPESHFRVPAIVNALGEMKLTSKFRGSEVVKLQHFEPASTDDIASVHARDYVSGLEKAMDQALENGSHSKKNKKALEKGLIVIEKSGPTYATSTTFRESIVAAGAGLALVDSVVAASKINKDPPTGFALIRPPGHHAVPQGPMGFCIFGNVAIAARHAQLVHGLKRVFIIDFDVHHGNGTNDAFYNDPDVFFLSFHQDGSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDTTIRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDSIANLQLTTGTYYMLASNIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDKSLASEFDNPNILCEEPTKKVKQAIHRIKCIHSL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05215 447 Gene3D Histone deacetylase domain 71 447 IPR037138 -
Trre7g05215 447 CDD HDAC_classII 91 411 - -
Trre7g05215 447 SUPERFAMILY Arginase/deacetylase 86 414 IPR023696 -
Trre7g05215 447 PRINTS Histone deacetylase superfamily signature 256 271 IPR000286 -
Trre7g05215 447 PRINTS Histone deacetylase superfamily signature 222 245 IPR000286 -
Trre7g05215 447 PRINTS Histone deacetylase superfamily signature 340 350 IPR000286 -
Trre7g05215 447 PANTHER HISTONE DEACETYLASE 2-RELATED 60 415 - -
Trre7g05215 447 Pfam Histone deacetylase domain 91 409 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05215 Trre-Chr7 58653513 58657424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05215 - - tpra:123914085 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05215 7 58653513 58657424 Trre7g05215 7 58653513 58657424 ECH