Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05198 ATGGTGAGGCTTTTAGGGTTCGCTCGTGGTTATGCAGATGAACCCCGTGAAATTGAGTCAAAGTCAAACCTGACTAGTGACTCTAGTGAAAATGGTTGGCTTATTAGGTTCTTTGATTCGTCGTTTTTCTGCGAATGGATTGCTGTGAGTTACTTGTACAAGCATGATCATGCTGGGGTGCGTGATTATCTTTGTAATAGAATGTATACTCTTCCCTTGCAAGGGCTTGAGAGTTATTTGTTTCAAATATGTTACATGACAATACATAAGCCTAGTCCATCGTTGGATAAGTTTGTGATAGATATGTGCTCGAAGTCGCTTAAGATTGCTTTGAAGGTGCATTGGTTCTTAATGGCAGAGCTGGAGGACTCTGATGATAATGATGGGATTAGTAGGATTCAGGAGAAGTGTCAGATGGCAGCCACCTTGATGGGTGAGTGGCCGCCTTTGATACGGCCTCATACTGAACCTCCGAGTCCTGGGGGCAAGAGCCAAGTTTTGAATAGGTTACTTTCATCTAAAAATCGCTTGTTGTCATTAACAACCTCACCACCTAAGTCTTTGTCATTTTCTTCTTCGCCGGGAAATAATTTGCAAGACGATGGCAATCCCCTGTCTCCTGATGAGAACAGGATATTTAAGAAGTTTATGCCAAGTCCAAAGGTTAGAGATGCTTTGCTTTTTAGAAAGTCAGCGGACAAAGATGATGGCGACTCTGAAAAGGATGGGTTTTTTAAGAGGCTTTTAAGAGATAGCAAAGGTGATGATGAGCTTGGCCAAAAAATTCGTGATGCATTTCATTTTCGGAAGTCGTCCGAGAAAGATGCCTTGGACTCCGAGAAAGAAAACTTCTTTAAAAGGTTCTTAAGAGACAGTAAGGAAAGTACTAGAGGTGATGATGAAGACTCTGAAAAGGACGGTTTCTTTCAAAGGATCTTAAGGGACAGTAGAAGCGAAGACGAGGATGTGACCTCAAGTTCAGAAGGGTTTTTTAAGAAGTTGTTTCGTGATAGTAAGAATGATCCTGAGGACAGAACAAATACAAAAACAGTGGAAGATGAAGAGAAGAACGGAGTTTTCCGAAAGTTTTTCCGGGAGAAATTTGAAGATAGGAAGGATGGGCGTGATAGAAATGACAATAGAAATGTTGCTAATTCTGAAGAGAATTGTCCAAAACCCGATGAAGAGGATGAAAAAGATGGGTTTTTCCGGAAATTCTTCAAGGATAAATTTGAGGACAAGAAAGACACAAAAGATAAAATTGAAGAGGGTACTGCCAATGGTGAGGAAGAAGAGCCTTCTGAGGTTTCCTTGTTTAAAAGACTATTCCGCGTGCACCCTGAAGACGACCAAAGTAGTCCAGCCAATGAAAATAGCAATAATGGTGGTTTATTTCAAAGTAGTCCAGGTACAGAGAATTTTTTCCGTAAATTATTCAAAGACCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGGTCAAAGCGACAGAAAGAGAAGCATCCTGGGTCCCCAAAGCAGCAAAGTGAAAAATCGAGCACAAAGCCCCCATTACCAATCAATCCAACTCAGTTCCGGAAAGGGGCTTACCATGACTCATTGGAGTTTGTGCAGTCATTATGTGACACATCATATGGGTTAGTGGATGTATTTCCAATTGAAGATCGCAAAAGTGCTCTTCAAGAGTCGCTTAGAGAGATCAATATACATGTAAAAGAGGTTCAGAACACTGGTGGAGTCTGTTTTCCACTGGGAAAGGGCATGTATCGCGTGCTTCATATGCCAGTAGATGAAGCTGTTCTGTTGAATTCTAGGGAGAAGGCACCTTATATGATATGCATAGAAGTTTTGAGATGTGAAATGCCAAGTAATTTCAAGGAGGCGTCCAGTTCTCAGAAGCTTTCTCAAGGTGGAATTCCTTTGGCAAATGGAGATGCTTTCTTGCAAAAACCACCCCCTTGGGCATACCCATTATGGTCAGCACAAGAGGTTTACCGTAATAGCAATGATAGGATGTCCAGATCGACTGCTCAGGCAATTGACCAGGCAATGACTCATGTATCTGAGCCAAAAGTCAAACTTGTTAGCCTGAATCTTTCGGTTGAAACACGATATAATGGTCAGGAAGGAGCAGAACACGACAGTGATTTGGAATGGGTACGAGTAGTATTGACAGCTGATCCTGGGGTTAAATTGGAAGATATCGAGGATCAAGCTCCGCCTCGGAAAAAGGAACATCGCCGTGTTCCAAGTACAGTGGCAATGGAAGAAGTGAAGGCTGCAGCAGCAAAAGGAGAAGCACCTCTTGGACTCCCTTTGAAAGGTGCTGGCCAAGACTCATCAGATGCACAGCCAAGGGCTAATGGAATTACTCCCAAAGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGATAGGGTATGCAAGGCTTCCATATACGGAAAGTTACCTGGTTGGGACTTGCGATCGATTATTGTGAAGAGTGGAGATGATTGTAGGCAAGAGCATCTTGCTGTTCAACTTATTTCTCATTTCTATGATATTTTCCAAGAAGCTGGTCTACCCCTTTGGCTGCGCCCTTATGAAGTTCTGTGTACTTCTTCTTATACAGCTCTCATCGAAACAATTCCAGATACGGCTTCTCTACATTCAATCAAAAGTAGATATCCCAACATCTCAAGTTTACGTGAATTCTTCAATGCTAAATATGAAGAAAATTCTCCAAGTTTTAAACTTGCCCAGAGAAACTTTGTTGAGAGTATGGCAGGATATTCCCTGGTGTGCTACTTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCCTTTTGGACGAAGAAGGTCACATCATACATATTGACTTTGGCTTCATGCTTTCCAATTCACCTGGTGGGGTTAATTTTGAAAGTGCGCCTTTTAAATTAACACGCGAACTTCTTGAGGTTATGGATTCTGATGCCGAGGGTCTGCCAAGCGAGTTCTTTGATTATTTTAAGGTTTTATGCATTCAAGGCTTCCTCACTTGCCGCAAGCATGCTGAGCGTATTATTCTTCTTGTTGAGATGTTGCAGGATTCGGGTTTCCCGTGCTTTAAAGGTGGTGTGCGGACAATACAGAACTTGCGAAAGCGATTCCATCTCAGTTTAACAGAAGAGCAATGTGTCTCCTTGGTGCTTTCTCTTATTAGCAGTAGCCTTGATGCTTGGAGGACACGGCAGTATGATTATTATCAGAGGGTTTTGAATGGAATATTGTGA 3264 0.4237 MVRLLGFARGYADEPREIESKSNLTSDSSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGLESYLFQICYMTIHKPSPSLDKFVIDMCSKSLKIALKVHWFLMAELEDSDDNDGISRIQEKCQMAATLMGEWPPLIRPHTEPPSPGGKSQVLNRLLSSKNRLLSLTTSPPKSLSFSSSPGNNLQDDGNPLSPDENRIFKKFMPSPKVRDALLFRKSADKDDGDSEKDGFFKRLLRDSKGDDELGQKIRDAFHFRKSSEKDALDSEKENFFKRFLRDSKESTRGDDEDSEKDGFFQRILRDSRSEDEDVTSSSEGFFKKLFRDSKNDPEDRTNTKTVEDEEKNGVFRKFFREKFEDRKDGRDRNDNRNVANSEENCPKPDEEDEKDGFFRKFFKDKFEDKKDTKDKIEEGTANGEEEEPSEVSLFKRLFRVHPEDDQSSPANENSNNGGLFQSSPGTENFFRKLFKDRDRSIEDSELLGSKRQKEKHPGSPKQQSEKSSTKPPLPINPTQFRKGAYHDSLEFVQSLCDTSYGLVDVFPIEDRKSALQESLREINIHVKEVQNTGGVCFPLGKGMYRVLHMPVDEAVLLNSREKAPYMICIEVLRCEMPSNFKEASSSQKLSQGGIPLANGDAFLQKPPPWAYPLWSAQEVYRNSNDRMSRSTAQAIDQAMTHVSEPKVKLVSLNLSVETRYNGQEGAEHDSDLEWVRVVLTADPGVKLEDIEDQAPPRKKEHRRVPSTVAMEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKDRVCKASIYGKLPGWDLRSIIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFNAKYEENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGLPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGVRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05198 1087 SMART pi3k_hr1_6 826 1085 IPR000403 -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 486 524 - -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 414 451 - -
Trre7g05198 1087 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 804 1072 IPR000403 -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 294 326 - -
Trre7g05198 1087 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Trre7g05198 1087 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 829 843 IPR018936 GO:0016301
Trre7g05198 1087 MobiDBLite consensus disorder prediction 452 470 - -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 181 210 - -
Trre7g05198 1087 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 334 353 - -
Trre7g05198 1087 CDD PI4Kc_III_beta 795 1087 - -
Trre7g05198 1087 Gene3D - 884 1085 IPR036940 -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 486 506 - -
Trre7g05198 1087 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 1087 IPR015433 GO:0046854|GO:0048015
Trre7g05198 1087 MobiDBLite consensus disorder prediction 181 204 - -
Trre7g05198 1087 SUPERFAMILY Protein kinase-like (PK-like) 554 1080 IPR011009 -
Trre7g05198 1087 Gene3D - 671 879 - -
Trre7g05198 1087 Pfam Phosphatidylinositol 3- and 4-kinase 826 1033 IPR000403 -
Trre7g05198 1087 FunFam Phosphatidylinositol 4-kinase beta 1 884 1085 - -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 414 470 - -
Trre7g05198 1087 Gene3D - 40 146 IPR042236 -
Trre7g05198 1087 FunFam phosphatidylinositol 4-kinase beta 1 720 879 - -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 371 398 - -
Trre7g05198 1087 MobiDBLite consensus disorder prediction 769 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05198 Trre-Chr7 58540662 58549281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05198 1 1086 Lipid Metabolism Gene Families AT5G09350 69.947 0.0 1528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05198 K19801 - gmx:100778394 1818.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05198 7 58540662 58549281 Trre7g05198 7 58540662 58549281 ECH