Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05184 ATGTTATCAAATATATTTGCAGAGCTATGCATAGCTCCAAGCAAAATCAAGGCCAACAATAAAGTCAACAATGTTTCATCCGATGAAACATGTCTTGATTTTTGCAATTTCATTCCAGAGTCCTTCAAAGTGTTATTCGAGAAAGGACTTCCATGTAATGAATCTGTGGAAGAAAAACTATGTTGGATTCGGTCAGAAATCATAGGCAACGATGAAGAATTCAACTCTTCATTTGGTAAACGAAAACTTGTCTATGCTGATCACACAGCTTCTGGTCGCAGTCTTCATTACATTGAAAATTTCATCACCAAACATCTTCTTCCTTTCTACGGCAATACCCATACTTGTGAGAGTTATGTTGGAGATAAGACAACAAAAATGGTACATGAAGCAACCAAATATATTAAGAAATGTTTAGGTGGTGGAGAAGACGATGCACTCATATTATGCGGCTCGGGCGCAACGGCAGCCATCAAGAGGCTTCAAGAAGTGATGGGAATTGCCGTGCCATCTATTTTGAGGGAAAAAATGTTGAGATGCCTTAGTGAAGAAGAAAGATGGGTGGTTTTTGTAGGACCTTATGAGCACCATTCAAATTTACTTTCTTGGAGGCAAAGTTTGGCTGAAGTTGTAGAGATTGGCCTAGATGATAAAGGGTTGCTTGATATGGAAGATTTAAAGCTACAACTTGAGGCCTATAAAGATACCAATCGACCCTTGTTGGGATCTTTCTCAGCTTGTAGTAATGTCACTGGAATTTACTCGGACACACGAGCAATTGCTAAGCTTCTTCACCAATACAATGCATTTGCATGCTTTGATTTTGCAGCAAGTGGTCCGTATGTGGAAATTGACATGAGATCTGGGGAGATTGATGGGTATGATGCTGTGTTCATCAGCCCACATAAGTTTCTTGGTGGACCTGGCTCTCCAGGAGTGCTATTAATGAACAAAGTCTTGTATAAGTTGACATATTCACCTCCATCTACTTGTGGAGGTGGCACCGTTAATTATGTCAATGGCTTCAGTGAAAAGGATACATTATACATGGAGGACATAGAGGAAAGAGAAAATGGGGGCACACCTCCAATAATCCAAACAATGAGAGCAGCATTGGCATTTTGGGTGAAAGAGTACATTTACTATGAAGAGATTGAAAAAAGAGAACAACTCTACATTAACAAAGCACTTAAGAGACTCATGCCTAACCCAAACATTGAGATTTTAGGGAACTTAAGCACCAAAAGACAAGCTATTTTGTCTTTTGTGATTTTTTATACCACCAAGAGACTCATGCCTATAGAAAGTGCCACATCATAG 1320 0.3939 MLSNIFAELCIAPSKIKANNKVNNVSSDETCLDFCNFIPESFKVLFEKGLPCNESVEEKLCWIRSEIIGNDEEFNSSFGKRKLVYADHTASGRSLHYIENFITKHLLPFYGNTHTCESYVGDKTTKMVHEATKYIKKCLGGGEDDALILCGSGATAAIKRLQEVMGIAVPSILREKMLRCLSEEERWVVFVGPYEHHSNLLSWRQSLAEVVEIGLDDKGLLDMEDLKLQLEAYKDTNRPLLGSFSACSNVTGIYSDTRAIAKLLHQYNAFACFDFAASGPYVEIDMRSGEIDGYDAVFISPHKFLGGPGSPGVLLMNKVLYKLTYSPPSTCGGGTVNYVNGFSEKDTLYMEDIEERENGGTPPIIQTMRAALAFWVKEYIYYEEIEKREQLYINKALKRLMPNPNIEILGNLSTKRQAILSFVIFYTTKRLMPIESATS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05184 439 Pfam Aminotransferase class-V 84 424 IPR000192 -
Trre7g05184 439 PANTHER CYSTEINE DESULFURASE 54 424 - -
Trre7g05184 439 SUPERFAMILY PLP-dependent transferases 78 424 IPR015424 -
Trre7g05184 439 Gene3D - 99 377 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05184 Trre-Chr7 58447918 58452120 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05184 - - gmx:100778947 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05184 7 58447918 58452120 Trre7g05184 7 58447918 58452120 ECH