Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05162 ATGGTATTGTCTCATGGGGATGCACACTCGGATACTGCGAGGATGGAACAAATAATCACTGAATTTTTCGCGAAAAGTGTTCACATAATACTTGAATCGAGGGCAATTTACGCTTCCTCGCGTAATTCATATGGTGGTTATAAATCAGATTCATCGTCTTCTTCGTCTTCATCTAGTGTGAGGCCGAGGGATAAATGGTTCAATTTGGCACTTCGGGAGTGTCCAGTGGCGTTAGAGAATATTAACAATCATGAGTGTGTTATTGTTGATGTGATTTTGGTTCGTAGGTCTCTAGATTGGGACCCCATGATTCATAAAAAGGTTCTTTGTAAAGAAAGATATCCACTTTGTTGCAGTGGGGCAGAATTGGGGGTTGACGCGAAGAGTGAAAAGATTGTAGAGAGATGGATTGTGCAGTATGAGAATAGGAAGAATGTAAAGGATTGTAATTTTGGGACTAGAAGGTCAAGTAATAATTCCTTGCAAAACTTGTATAAGAAATCAACTTTACTTTTGAGGTCTTTGTATGCCACAGTTAGACTTTTACCTGCATATAAACTTTTCAGAGATCTTAATTCGTCTGCACAGATTCGTCCTTTCACCCTTGCTCACCGAGTGTCTTCTTTTGTTGAGCCCTTCACCCGAAAACTAGAGTCAGAAATGATGAAATATAGTTTTACTCCTGTGGATACTTCTTCTGGTAGGATCTGTCTTACGGTGATGTATTGTCCCAAGGCCTCGGATTTGAGCTGTGAGAAATTACCTTCTATGTCCCCTCAAGTTATTTCTGACTACGTTGGAAGTCCATTGGCAGATCCATTGAGGAGGTTCCCATCACTTCCTTTGTCGGGATTACCATGTCACGGCTGTTCGTCGCCAAGGAGACATAGTTGGAATTTTGAAGACAGTAAAGCCTCATCTACTTCCATTAATGATTCATCTTTGCCTATACATTCAAAATCACAAATATTAGTGACTAATACAAGTTCACGGCTACATGATTTGCCACCAAATCCTCACTTAAGAGGTTCAAGGTGTACTTATAAGATTGATAGAAGTACAAATGTGATGCAAACTGGTGCTACAGATGAGAAGGTCTTTTCTCTAGGAAAAAATGAGCTCCAAAAGTATTCTGGAGTCAAGATATCAGCTAACAGTTTTCCACGTATTTCTAGTAGGTCTTACCTGGATGATTTTGATGATACTGATTTTAGTTGTCCATTTGATGTGGATTATGATGAAATGAAGAATCTAGGAAGCAGAACAAAATCTTTAGATCGTGGTCATGTGGCTGAGGCACTTGAAACTGGAGGATTCTTTCCCATCAGAAAGTCCAATGATGCTGCTGTCGGTGCGCTTGTACATATGCTGAAGAAAGCACCACCTCTCCATCAAGATTTTTACACTTCCGAACACCCGTCAGTACTCCGCGGAGGGCTGCAACCAACAGCAAATCCCTCCTTGAGGGTTAATCTCACAACTAAACCTACAAAGATATCCGTTCAGAAACCAAATAAAGAAAACCTATCGCATGGCACACACTGTGAAACCTGTAACAACATTCAAGAACTCAATAAGAACCAAGAGGCATCTATATCAACTAGGAAAACAACAAGGGATGCATTGGAAGAGTTCCATGGTTACAGGGAGATGAAAAACTTGTTGGTTATGCGAGATATTAAACCACAGATATAA 1695 0.4029 MVLSHGDAHSDTARMEQIITEFFAKSVHIILESRAIYASSRNSYGGYKSDSSSSSSSSSVRPRDKWFNLALRECPVALENINNHECVIVDVILVRRSLDWDPMIHKKVLCKERYPLCCSGAELGVDAKSEKIVERWIVQYENRKNVKDCNFGTRRSSNNSLQNLYKKSTLLLRSLYATVRLLPAYKLFRDLNSSAQIRPFTLAHRVSSFVEPFTRKLESEMMKYSFTPVDTSSGRICLTVMYCPKASDLSCEKLPSMSPQVISDYVGSPLADPLRRFPSLPLSGLPCHGCSSPRRHSWNFEDSKASSTSINDSSLPIHSKSQILVTNTSSRLHDLPPNPHLRGSRCTYKIDRSTNVMQTGATDEKVFSLGKNELQKYSGVKISANSFPRISSRSYLDDFDDTDFSCPFDVDYDEMKNLGSRTKSLDRGHVAEALETGGFFPIRKSNDAAVGALVHMLKKAPPLHQDFYTSEHPSVLRGGLQPTANPSLRVNLTTKPTKISVQKPNKENLSHGTHCETCNNIQELNKNQEASISTRKTTRDALEEFHGYREMKNLLVMRDIKPQI 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05162 564 Gene3D HORMA domain 4 248 IPR036570 -
Trre7g05162 564 Pfam Autophagy-related protein 13 19 242 IPR018731 GO:0006914|GO:1990316
Trre7g05162 564 PANTHER UNCHARACTERIZED 351 556 IPR040182 GO:0000045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05162 Trre-Chr7 58223750 58226362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05162 K08331 - gmx:100798585 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05162 7 58223750 58226362 Trre7g05162 7 58223750 58226362 ECH