Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04894 ATGCAATCTAGAGCTATCCGCCATATTTTTTCGGCATCAGATGACACGGTTATGACAAAACAAATTCGCGCCACTCATGCTCCCATTGAAGAACAAGTTGATGTTAGACCTCTACTTAACGTTGTTCAAGACATTTTTCGCCAGGCAGCTTCTCTAATCCCCGACATCGTTCAGGGAAAGCAAGTGCAAATGGGCGTCGTGAAGGATAGTGCCAACGAATCTGACTTATTTGACATGCTAGAGATTTCTTATCACACAATTAACAAAATTTCTTGCGAGATATCTTGCAAATGTTTGATGGGTGGAGGAGATGCACATGCAACAACAATAGGAATACTTGGAATGCTATCAAGCTATTCATGGGATACCAAAGCGGTGATCGCCTTAGCAGCATTTGCAGCCAACTTGGGGGAATTTTGGCTAGTAGCTCAACTTTATGCGACCAACCGTCTTGCTAAGTCAGTTGCATTGTTGAAGCACATTCATGAAACACTGAATCAAGTTGATGATTTAGGACCAAAATTCGAAGCCGTGAACAACCTTCTCAAGGCCATGTTGGATGTTACCAATTGCATTGTTGAGTTTCATGAGCTTCCTGATCAGTATATTGACCATGAAGCACCTGAAACACAGACTGCTTCCTCTCTTATTCCAAGTGCTGTTTATTGGACCATTAGGAGTATTGTGGCTTGTGCATCACATATTTTAGGCATTATTGGCTTGGGTCAAGGATATATGACATCAACAATTGAGACATGGGAGCTTTCAAGTTTGACTCATAAGCTAGACAACATGAATGGTCACCTACAAAAGCAGCTCAGTATTTGTCGTCAACATTTAGATGACAACAAACAGAGAGAAGCATTTCAAACACTTCGGCACCTTTTTGAGACATCCCACCAAGATAACATTCAGGTTCTCAAAGCTTTGATTCGCTGCAAAGATGATCCATTGCCACTGTTTGATGGTTCTACCAAGCAAAGGGTTAACATTGAAGTATTGAGGAAGAAAATTGTGTTGCTCTACATAACAGACCTCCACCATATATCTGATCAAGAGGTTGTGATTTTTGAACAAATGTTTCAAGAGTCGCGTCAAGATTCAACAAGGTTAGAGAGTCAATACGAACTCGTTTGGATTCCGGTTGTGGAAAAGGGAACTGCATGGACTGAATCGAAACAGAAGTTCGAGAGGCTACAATCAATGATGCCATGGTACTCAGTTTATGACCCTTCACTTTTAGAGCCAGCAACCATTAGGTACATTAAGGAGGTATGGCTTTTTAACACAAAGCCTATGCTTGTGGTGTTGGATCCACAAGGGAAGGTTGTGAACCTGAATGCAGTACATATGATGTGGATTTGGGGAAGCATGGCTTATCCTTTCTCTAGCTTAAGAGAGGAAGCTCTTTGGAAAGAGGAAACATGGGGACTTGCACTATTGGCTGATACAATTGATCCATTACTCTTTGATTGGGTATCAGCAGGCAAATACATATGCTTGTATGGAGGGGATGATATGGAATGGATCCGTAAATTCACAAGTGCGGCAAAATCAATGGCAAGAACTCTCCAAATTCCACTGGAAATGATGTATGTAGGGAAAAGCAACCCAGGACAGAAAGTTAGAAAAATCAACAAAACAGTAATAGAAGAAAATCTTAGCAACATACTCGCGGATCCAACCATAATTTGGTTCTTCTGGGTTAGGCTAGAAAGCATGTGGCACTCCAAATTACAACAAAGCAAGACAGTAGAGAATGACCAAATAATGCTAGAAATAATGAGAATCTTAAGCTTTGATAGCAGTGATCAAGGTTGGGCTGTTATAAGTCAAGGAACAGTAAAAATGACACAAGGCAAAGGAGATTCATTTTTAAAGTGTCTTAATGAATTTGATGAGTGGAAGGATAATGTGAAAGATAAAGGAGTTTTGCCTGCAATGGATGATTATATACAAGGTATCCAACAACCACACCATTGTAACAGATTAATACTTCCAGGAGTTGAAGGTACGATTCCAGACAAGATTGTTTGTGCTGAATGTGGCCAGCCAATGGAAAAGTTCTACATGTATCGCTGCTGCAATGAGTAA 2094 0.4054 MQSRAIRHIFSASDDTVMTKQIRATHAPIEEQVDVRPLLNVVQDIFRQAASLIPDIVQGKQVQMGVVKDSANESDLFDMLEISYHTINKISCEISCKCLMGGGDAHATTIGILGMLSSYSWDTKAVIALAAFAANLGEFWLVAQLYATNRLAKSVALLKHIHETLNQVDDLGPKFEAVNNLLKAMLDVTNCIVEFHELPDQYIDHEAPETQTASSLIPSAVYWTIRSIVACASHILGIIGLGQGYMTSTIETWELSSLTHKLDNMNGHLQKQLSICRQHLDDNKQREAFQTLRHLFETSHQDNIQVLKALIRCKDDPLPLFDGSTKQRVNIEVLRKKIVLLYITDLHHISDQEVVIFEQMFQESRQDSTRLESQYELVWIPVVEKGTAWTESKQKFERLQSMMPWYSVYDPSLLEPATIRYIKEVWLFNTKPMLVVLDPQGKVVNLNAVHMMWIWGSMAYPFSSLREEALWKEETWGLALLADTIDPLLFDWVSAGKYICLYGGDDMEWIRKFTSAAKSMARTLQIPLEMMYVGKSNPGQKVRKINKTVIEENLSNILADPTIIWFFWVRLESMWHSKLQQSKTVENDQIMLEIMRILSFDSSDQGWAVISQGTVKMTQGKGDSFLKCLNEFDEWKDNVKDKGVLPAMDDYIQGIQQPHHCNRLILPGVEGTIPDKIVCAECGQPMEKFYMYRCCNE 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04894 697 Pfam Sieve element occlusion N-terminus 13 300 IPR027942 -
Trre7g04894 697 Pfam Sieve element occlusion C-terminus 466 696 IPR027944 -
Trre7g04894 697 Gene3D Glutaredoxin 320 462 - -
Trre7g04894 697 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 4 696 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04894 Trre-Chr7 56168085 56171319 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04894 - - gmx:100799626 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04894 7 56168085 56171319 Trre7g04894 7 56168085 56171319 ECH