Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04554 ATGGATTCATCACATTTTTCTTCTTTCTTTCAATTCCTTTCTAAAATCCTTCTACTACTTACCTTCCCTTCTATGTTACCAACATCTTCAACCACTGAATTCTCTATCAAGGAAGCAACAATACAAGATCTTCAACTAGCTTTTCAAACAAACCAATTAACATCAAGACAACTTGTTAAGTTCTACCTTAACCAAATCAAAATCCAAAATCCAATCCTCAAAGGAGTCTTGGAAGTGAATCCAGATGCACTAGCACATGCAGATATAGCTGATTATGAGAGAAGAGAAAAAGCACCAGGCTCTCTTTCAAGGTTGCATGGAATTCCCTTTTTGATTAAGGATACCATTGCTACTAAGGATAAGTTGAACACTACTGCAGGCTCTTTTGCACTTCTTGGATCAGTGGTGCCAAGAGATGCAGGTGTTGTTACCAAGTTAAGGGAAGCTGGTGCTATCATATTAGGGAAGGCCACTTTGAGTGAGTGGTCTCATTACAGGACTTTTGAAGCTCCTAATGGTTGGAGTGCCAGAGGTGGACAAGGAAAGAATCCATACACATTGGACGAACCGTGTGGATCAAGTAGTGGATCAGCAATATCGGTAGCAGCAAATTTGGTGGCTGTGTCACTTGGTACTGAAACCGATGGCTCTATTTTATGCCCTTCAAGTATGAACTCGGTAGTAGGTATCAAACCAACAGTTGGTCTCACTAGTAGAGCTGGTGTAGTTCCAATTAGCCCGAGGCAAGACACCGTTGGGCCAATTTGCAGGACTGTATCAGATGCTGCTTATGCTCTTGAAACCATAGCAGGCATAGACACTTACGATAATGCAACAATCGAAGCATCAAAGTATATCCCAAAAGGTGGCTATGCTCAATTTCTAAAGAAAGACGGACTAAGAGGAAAGAGATTAGGAGTAGTGAGACGGTACTATGATTTTGGAAATGACACTTTTCTGCATGAAACTTTCAAGCTACACCTAAATACGTTAAGGCAAAAAGGTGCAGTTGTGGTCGACGATTTGAAGATTGATAACATTGATGAAATTATCAATGGTCAAAGCGAAGCAATCGCTTTGAATTTTGAATTCAAATTATCATTGAATGCATACCTCAAAGATTTAATTGCTGCACCAGTGAAAAGCTTAGCAGATGTGATATCCTTCAACAATAAACACCAAAAATTGGAGAAAATGGAGTATGGCCAAGATGTCATGGTGCAAGCCGAAAAAACAAATGGAATCGGGGAAGTACAGACACAAGCATTGTTAAACTTGACAAGATGGTCACAAGATGGATTTGAGAAACTCATGAAAAGAAATGAACTTGATGCTGTGGTAACACCTTTTTCATCTTTTAGTAGCATACTTGCAATTGGAGGTTATCCAGGAGTGAGTGTTCCAGCAGGATATGAAAAGGGTGTGCCATTTGGAATTTGTTTTGGAGGTTTGAAAGGGTCAGAACCTAAGTTGATTGAAATTGCTTATTCATTTGAGCAAGAAACTTTGATCAGAAAGCCACCAAAAGCAGTGAGGATTTTGACACAATGA 1551 0.3965 MDSSHFSSFFQFLSKILLLLTFPSMLPTSSTTEFSIKEATIQDLQLAFQTNQLTSRQLVKFYLNQIKIQNPILKGVLEVNPDALAHADIADYERREKAPGSLSRLHGIPFLIKDTIATKDKLNTTAGSFALLGSVVPRDAGVVTKLREAGAIILGKATLSEWSHYRTFEAPNGWSARGGQGKNPYTLDEPCGSSSGSAISVAANLVAVSLGTETDGSILCPSSMNSVVGIKPTVGLTSRAGVVPISPRQDTVGPICRTVSDAAYALETIAGIDTYDNATIEASKYIPKGGYAQFLKKDGLRGKRLGVVRRYYDFGNDTFLHETFKLHLNTLRQKGAVVVDDLKIDNIDEIINGQSEAIALNFEFKLSLNAYLKDLIAAPVKSLADVISFNNKHQKLEKMEYGQDVMVQAEKTNGIGEVQTQALLNLTRWSQDGFEKLMKRNELDAVVTPFSSFSSILAIGGYPGVSVPAGYEKGVPFGICFGGLKGSEPKLIEIAYSFEQETLIRKPPKAVRILTQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04554 516 Pfam Amidase 58 451 IPR023631 -
Trre7g04554 516 PANTHER AMIDASE 15 510 - -
Trre7g04554 516 Gene3D Amidase signature (AS) domain 24 510 IPR036928 -
Trre7g04554 516 SUPERFAMILY Amidase signature (AS) enzymes 35 509 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04554 Trre-Chr7 53537450 53540363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04554 33 281 Acyl Lipid Metabolism Gene Families AT5G07360 31.600 4.77e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04554 K01426 - gmx:100807918 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04554 7 53537450 53540363 Trre7g04554 7 53537450 53540363 ECH