Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04538 ATGGATCCAGACGCGTTGGCAAAGGCATTCGTGGAGCACTACTACACCACCTTCGACAACAATCGCGGTGGACTTGCTACTCTTTACCAGGAAGGTTCTATGCTTACCTTCGAAGGTCAGAAGATTCAAGGTTCTCCTAACATCGTCGCTAAACTCACTTCTCTCCCTTTTCAGCAGTGCCATCACTCCATCACCACCGTCGATTGTCAACCCTCCGGTGTTAACGCCGGCATGCTCGTCTTTGTCAGTGGTAATCTACAACTCGCTGGTGAACAACATGCCCTCAAATTCAGCCAGATGTTCCATTTGATACCAACACAGCAAGGAAGCTATTATGTGCAGAATGACATATTCCGTTTGAATTATGCTTGA 372 0.4731 MDPDALAKAFVEHYYTTFDNNRGGLATLYQEGSMLTFEGQKIQGSPNIVAKLTSLPFQQCHHSITTVDCQPSGVNAGMLVFVSGNLQLAGEQHALKFSQMFHLIPTQQGSYYVQNDIFRLNYA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04538 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 2 122 IPR045875 GO:0006913
Trre7g04538 123 FunFam Nuclear transport factor 2 1 123 - -
Trre7g04538 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Trre7g04538 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Trre7g04538 123 CDD NTF2 2 122 IPR018222 -
Trre7g04538 123 Gene3D - 1 123 - -
Trre7g04538 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04538 Trre-Chr7 53411524 53413072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04538 - - gmx:100777334 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04538 7 53411524 53413072 Trre7g04538 7 53411524 53413072 ECH
Trre5g03057 5 25471154 25473620 Trre7g04538 7 53411524 53413072 PCT