Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04524 ATGTACGGTAAAGTGGTTCTCACATTCATATTCGTCTTCCTTCTTCTAATCTCCTACTCAATTTTCATCGGCACTCTCGACATTCGATCTTATTTCTTCCAATCACAAGTTTTTCAACCCGCTCCATGTAAACCCGACCCGCCTCTTCGTCTTTACATGTACGATCTCCCTCCTCGTTTCAATGTCCAAATGATTAACCGTAAGATCAACTCCGAATCTCCCGTTACTGCTAAAGACTTTCCGCGGTGGCCGGATAATTGGGGACTCAAGAAGCAACATAGTGTTGAGTATTGGATGATGGGATCGCTTATACATGAAGGTGAGTCTAGTGAAGCTATCAGGGTTTTCGATCCTGAATTGGCGGATGCTTTTTTTGTTCCGTTTTTTTCTTCCTTGAGTTTTAATACGCATGGTCATACTATGACGGATCCTGCTACCGAGATTGATCGCCAATTGCAGGTTGATCTGATGGAATTATTGAAGAAATCTAAATATTGGGAGAGGTCTAAAGGCAGAGACCACATATTTCCTATGACACACCCCAATGCCTTTAGGTTCCTACGAAATCAAGTGAACGATACTATTCAAGTTGTCGTGGATTTTGGCCGCTACCCCAAGGGCATGTCTAATTTGAAAAAAGATGTGGTGTCCCCATATGTGCATGTTGTGGATTCTTTTACTGACGATGAATCTGAAGATCCGTATGAGACTCGTTCTACACTGCTTTTCTTTCGAGGGAGGACTTACAGGAAGGATGAAGGCATTATCCGTGCTAAACTGGCAAAGATGTTGACTAATTATAGTGACGTTCACTATGAGCGAAGTGTTGCAACAGAAGAAAACATAAAAGAGTCATCTAAAGGGATGTGTTCATCAAAGTTCTGTTTGGATCCAGCAGGAGACACACCATCATCTTGTCGCCTTTTTGATGCCATCGCGAGTCACTGTGTTCCAGTCATTGTGAGTGATCAAATTGAACTCCCGTTCGAGGATGAGATTGATTACTCACAGTTCTCTTTATTCTTCTCTTTCAAAGAGGCACTACAGCCTGGCTACATGATCGACCAGCTTCGTAAATTTCCAAAGCAGAAATGGACTGAAATGTGGAGGCAGCTTAAAAACATTTCCCATCATTATGAATTTCAGTACCCTCCGAAAAGAGAGGATGCTGTTAATATGCTTTGGAGACAGGTCAAACACAAGCTTCCAGGAGTCAGACTCTCTATTCATAGAAACCGAAGGTTAAAAATCTCAGATTGGTGGCGGAAGAGATGA 1275 0.4235 MYGKVVLTFIFVFLLLISYSIFIGTLDIRSYFFQSQVFQPAPCKPDPPLRLYMYDLPPRFNVQMINRKINSESPVTAKDFPRWPDNWGLKKQHSVEYWMMGSLIHEGESSEAIRVFDPELADAFFVPFFSSLSFNTHGHTMTDPATEIDRQLQVDLMELLKKSKYWERSKGRDHIFPMTHPNAFRFLRNQVNDTIQVVVDFGRYPKGMSNLKKDVVSPYVHVVDSFTDDESEDPYETRSTLLFFRGRTYRKDEGIIRAKLAKMLTNYSDVHYERSVATEENIKESSKGMCSSKFCLDPAGDTPSSCRLFDAIASHCVPVIVSDQIELPFEDEIDYSQFSLFFSFKEALQPGYMIDQLRKFPKQKWTEMWRQLKNISHHYEFQYPPKREDAVNMLWRQVKHKLPGVRLSIHRNRRLKISDWWRKR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04524 424 Pfam Exostosin family 47 353 IPR040911 -
Trre7g04524 424 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 394 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04524 Trre-Chr7 53242912 53247866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04524 - - mtr:25501743 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04524 7 53242912 53247866 Trre7g04524 7 53242912 53247866 ECH