Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04513 ATGATGCAGATTATTGGTGGCTTTCCTTTCACTACAGATATTGTGTTTATCTCTGGAACTGATTCAGAAAGTTCAATGGTAGAAGAGCGTGTCAATAGTCTTGCAGGAGCTTCACTGTCGAATGAACTGAAATATAAAGAACAAGCATATGATGAAAAGATTGAGAAAATTTTCAATTTGGCTGAGAAGGTGGATTTGGAATCCATTTCTGTTGGTAAGGCTGCGGTTGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGCCAGTCAAAAATTGCTCTGTCAAGAACCCTTAATGATAGAGAACAAGTTGATTATCTATCATATTGGCCTGCTGAGCTTTACACAGCTGTGCCATGCCGACCAATCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTGTAATCTGGCGTTGGGATGTTCATATTTCACTGGATATCATTGGACACTGGCTAGATTTGATGAACATTGATGGATGGATACCGCGAGAACAAATTCTGGGGGCTGAAGCACTAAGTAGGATCCCAGAGGAATATGTTGCTCAACATCCAACAAATGGAAATCCTCCAACTCTGTTTTTAGCATTAAGTGGTATAATCAATGCCTTGAAGAATAATGAGTTTAATGAGATAGATAGAAGCGAGATTTCTCTTTTTATGGAGCGTGCCTTTGGTCGATTAGAAGCTTGGTTTCAATGGCTAAATAATACTCAATCAGGGGAACAGATGAGCAGCTACTATTGGCGTGGACGGGACAATAGGACAATACTTGAATTAAATCCCCAGACGCTGTCCTCTGGATTTGATGATTATCCACGTGCTTCTCACCCAAGTGCAGATGAACGACATCTGGATCTTAGATGTTGGGTGTTACTTGCAGCAGAATGTATGCATTCTATTGAAGAGTTGTTGAATAAGGAAACCAAACCTGGAAAGAATTATGTTTCGACTGTGGAATTGCTATCAGATCTAGAATTATTGAACGAGATGCATTTTGATGACACGTATGGTGCTTACTTTGATTTTGGAAATCATACGGAAAAGGTTCGACTTGAATGGAAAGAATTAAAAGCAGGACACAATCATGCAACTCGCCAGCTTGTGCGAGAAGTTTTGGAGAGGCCTGTATTGAGATTGGTTCCTCATATTGGTTATGTTAGTTTCTTCCCATTCATGGGGAGAATCATTCCATCTGGATCATGGATCCTGGAAAAGCAGCTTGAACTCATTTCAAATAGCAGCCTATTATGGACTGACTATGGACTACGTTCTCTTGCCAAAACAAGTTCCTTGTACATGAAGTATAACACAGAACATGATGCTCCATATTGGAGAGGTACAATTTGGATAAACATGAATTACAGAGTTCTTTCAGCACTCCATCATTATTCAGAAGAGAATGGACCATATCAGGACAAAGCCAAAGCCGTCTACAAAGAATTGAGGAGCAATTTAATTAGAAATATGGTTCGCAATTACCATCAGACTGGATTTTTGTGGGAGCAGTACGATCAGGTTAAGGGGGACGGAAAAGGGGCACATCCATTTACAGGTTGGACATCAGTTGTAGCATTAATCATGGCGGAAGCATATGACACAATTTAA 1614 0.4002 MMQIIGGFPFTTDIVFISGTDSESSMVEERVNSLAGASLSNELKYKEQAYDEKIEKIFNLAEKVDLESISVGKAAVGNLLGGIGYFYGQSKIALSRTLNDREQVDYLSYWPAELYTAVPCRPIFPRGFLWDEGFHQLVIWRWDVHISLDIIGHWLDLMNIDGWIPREQILGAEALSRIPEEYVAQHPTNGNPPTLFLALSGIINALKNNEFNEIDRSEISLFMERAFGRLEAWFQWLNNTQSGEQMSSYYWRGRDNRTILELNPQTLSSGFDDYPRASHPSADERHLDLRCWVLLAAECMHSIEELLNKETKPGKNYVSTVELLSDLELLNEMHFDDTYGAYFDFGNHTEKVRLEWKELKAGHNHATRQLVREVLERPVLRLVPHIGYVSFFPFMGRIIPSGSWILEKQLELISNSSLLWTDYGLRSLAKTSSLYMKYNTEHDAPYWRGTIWINMNYRVLSALHHYSEENGPYQDKAKAVYKELRSNLIRNMVRNYHQTGFLWEQYDQVKGDGKGAHPFTGWTSVVALIMAEAYDTI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04513 537 Gene3D - 61 536 IPR012341 GO:0005975
Trre7g04513 537 Pfam Glycosyl hydrolase family 63 C-terminal domain 36 532 IPR031335 -
Trre7g04513 537 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 2 534 IPR004888 GO:0004573|GO:0009311
Trre7g04513 537 SUPERFAMILY Six-hairpin glycosidases 46 534 IPR008928 GO:0005975
Trre7g04513 537 FunFam mannosyl-oligosaccharide glucosidase 62 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04513 Trre-Chr7 53113989 53119959 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04513 1 534 Glycoside Hydrolase AT1G67490 64.860 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04513 K01228 - gmx:100795161 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04513 7 53113989 53119959 Trre7g04513 7 53113989 53119959 ECH