Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04491 ATGGCATTGAATTTCTCTCATCGGCCAATTTTTCCTAGTGGTTTGTCTGAGGATAATTTGGTTTCGCCGATGAGAATGGGGAACGGGTACCGAGTGGAGGGTATTCCTGAGAATAGTGGTAGTGGTAGTGGGGATGGATTTGGTAATGGATGGCATGATGTTGATAATTGTTTTGATTATGGTAGTGATAGATGTGATAGAGGGGGTGCAAGTGGTGTTACTCAGGATTCTGTTTCGAAGGACATTCTTGATCTTTTGCCTTCGGATCCTTTTGGGATGGATATCAGCACTACCTTCACAGCCATCACCGGATGGTTGGAAGATTTGGATTTTGATTATGGTGGGTATCGGCGAGATGAGATTGGAGCCAGTGGTGAGAATTATCCTTTGTTTGCTGGGTTGAATTTCATTTGGAATAATGCTGTAAGGTTCCACAACTTTCCTTCCCAAGGGGGGAGTGTATGCATTGAGGAGAAGATTTCTCAAGGGGTGAGTGGGTTCAGTGAGTGTTCTCGTAGAGAAGTCGGAGAAGCATCCTGCAGTTATGGTTCTGGATCTTCTTGTGACATGGATGGCGTTTTAGGTTTAACGTGTGGTTATAAAGATGTAGCTGTTGCTAGCGTGTCAGGTGACACAAACATGGATGATGTGAATTGCTCTGAAGTAGATGAAAACAAGCTTCATTGGGCTATAGAACATTCTCTTCAGTATCTGAGTTTGTCTGATCTTCTTGTTGTTGAGAGAGTATGTAAATATCTGCGTACTGTTGTTCAAGGTGATCCACTTCTGTGGAAAACTTTCCATGTTGACCAGCCTTTAAATGAAAGGATCACAGATGACATTCTTTTTGAATTAACCAGAAGGGCTCAAGGTCAACTTCTCTGCCTGAGCCTGGTGGAATGTACTAGGATAACTGATGATGGCCTGAGACGTGTTCTCGAAGCCAATCCCACAATAATCAAGCTGAGTGTTCCTGGATGTACAAGACTTAGTATCGAAGGTATTGTGGGTATGTTAAAATATCACAACTCTAAGAAGGAAACACAAGGGGTGAAACATTTACACATAGGCGGCCTCTATGGTGTTGCACAAAAGCATTTTGAAGAAATAAAACTCTTGTTGGAGCATTCTAAGGAAAAGGACTTTTTGGAGCATTCTAAGGAAAAGGACTCGTCGGGCACTGATGGTCAGGAGCATTCTAGGAAATCAGACTTGTTGGGCACTGACGGTCAGGAGCATTCTCACAAACCGCACTTCTATTGCCGCTGGAAATTGTATCGGCCCTTCGATGATGATCGGTCCTTGGATATTGAAGTTTGTCCTCGATGTCAGAATTTAAGGCTTATATATGATTGTCCTGCAGAAGGCTGTCAAGGGGTGGTAGGCAACGCCACTCAGGCTTGTAGGGCTTGCACTCTTTGCATACCGCGATGTAGTCAGTGTGGCCGCTGCATCAATGACAGCGAGTATGAAGAAACATTTTGTCTGGAATTGCTTTGCTCTTTTTGTTCTCAGCCTTTGGTCAAATTGTTAGGAAGGACAGATGGAAAGGTCGGGCTAGTCAGCTCAGTTCTACCTGAACAAAGTTAG 1590 0.4384 MALNFSHRPIFPSGLSEDNLVSPMRMGNGYRVEGIPENSGSGSGDGFGNGWHDVDNCFDYGSDRCDRGGASGVTQDSVSKDILDLLPSDPFGMDISTTFTAITGWLEDLDFDYGGYRRDEIGASGENYPLFAGLNFIWNNAVRFHNFPSQGGSVCIEEKISQGVSGFSECSRREVGEASCSYGSGSSCDMDGVLGLTCGYKDVAVASVSGDTNMDDVNCSEVDENKLHWAIEHSLQYLSLSDLLVVERVCKYLRTVVQGDPLLWKTFHVDQPLNERITDDILFELTRRAQGQLLCLSLVECTRITDDGLRRVLEANPTIIKLSVPGCTRLSIEGIVGMLKYHNSKKETQGVKHLHIGGLYGVAQKHFEEIKLLLEHSKEKDFLEHSKEKDSSGTDGQEHSRKSDLLGTDGQEHSHKPHFYCRWKLYRPFDDDRSLDIEVCPRCQNLRLIYDCPAEGCQGVVGNATQACRACTLCIPRCSQCGRCINDSEYEETFCLELLCSFCSQPLVKLLGRTDGKVGLVSSVLPEQS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04491 529 MobiDBLite consensus disorder prediction 384 414 - -
Trre7g04491 529 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 131 487 - -
Trre7g04491 529 Pfam F-box-like 235 268 IPR001810 GO:0005515
Trre7g04491 529 Gene3D Ribonuclease Inhibitor 231 380 IPR032675 -
Trre7g04491 529 SUPERFAMILY F-box domain 235 268 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04491 Trre-Chr7 52872297 52874754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04491 - - mtr:25501704 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04491 7 52872297 52874754 Trre7g04491 7 52872297 52874754 ECH