Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04328 ATGATTTCAACCATCCCCATTTCACCCTCATTCTCCTTCAATCCCACCATCACCAACACCCCTAATCTCCCTCTCCGCCTCCGCCACCGTCAACTCACCGTCAAAGCCCACTCTTCCACCAACTCCCCCGTTATCCACCACCTCAAAAACCTCGCCGGAGCAGCACTCTTCACCGCCGCAACCGCCACCGCTGCCCTCACATTCCCCGTATCCCCCGCCAGAGCTGAGCCACCTGAAACACTTACCGAAGTCCTCCCCGAAACTGAAGCCGAAACCATTATCGCCGACGCCGGAACAACATCCCCACCGTCAGAATTCCTTGAAACAAACGATGAATCAGTTGAAGCTCTGAAGTCTCTACTTCAGCAGAAGCTAGAACTCGGCGAAGTCGAAGAAGCATTGAAGATCCTCAAAAGCTTAATCTCATCACAACCGGAGGTAACAGAATGGAAATTCATTGCGGCTAGGTTAACGATCGAAATGGGAGACACTGACGCCGCGCGTAGTTTCTACGAAGAAATCTTGAGCTCAAATCCGCTTTCTTTCGAAGCGCTTTTCGAAAACGCGCTTTTAATGGACCGTGTTGGAGAAGGGGATGTTGTACTTGAAAAGCTTGAAGATGCTGTTAGAGTTGCAGTTGATGACAATAAGGAAAAAGAAGCTAGAGATGTGAAGTTGATAATGGCTCAGATTCTGTTTCTGCAGAAGAATATTGATGAAGCTTTGGGTATGTATCAGTTATTAATTGAAGAAGATCCTAATGATTTTAGACCTTATTTTTGCAGGGGAATGATTTATACATTGCTTCATAAGGACGATGAAGCTAAGGAACAATTTGCTAAGTATAAGGAATTGTCACCTAAGAAATTTGAGGTTGATGGTTACTTTAGAACCCCTTTGTCAAAGATCAAAGATTTTGGTACAGAACAAAGCTGA 936 0.4551 MISTIPISPSFSFNPTITNTPNLPLRLRHRQLTVKAHSSTNSPVIHHLKNLAGAALFTAATATAALTFPVSPARAEPPETLTEVLPETEAETIIADAGTTSPPSEFLETNDESVEALKSLLQQKLELGEVEEALKILKSLISSQPEVTEWKFIAARLTIEMGDTDAARSFYEEILSSNPLSFEALFENALLMDRVGEGDVVLEKLEDAVRVAVDDNKEKEARDVKLIMAQILFLQKNIDEALGMYQLLIEEDPNDFRPYFCRGMIYTLLHKDDEAKEQFAKYKELSPKKFEVDGYFRTPLSKIKDFGTEQS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04328 311 Pfam Tetratricopeptide repeat 226 254 IPR019734 GO:0005515
Trre7g04328 311 PANTHER TRANSMEMBRANE PROTEIN 165 290 - -
Trre7g04328 311 SMART tpr_5 222 255 IPR019734 GO:0005515
Trre7g04328 311 SMART tpr_5 114 147 IPR019734 GO:0005515
Trre7g04328 311 SMART tpr_5 256 289 IPR019734 GO:0005515
Trre7g04328 311 Coils Coil 202 222 - -
Trre7g04328 311 SUPERFAMILY TPR-like 108 289 IPR011990 GO:0005515
Trre7g04328 311 Gene3D Tetratricopeptide repeat domain 101 297 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04328 Trre-Chr7 51239184 51240119 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04328 - - psat:127100967 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04328 7 51239184 51240119 Trre7g04328 7 51239184 51240119 ECH