Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03963 ATGGATGAAGAGTATGATGTAATTGTCCTTGGCACTGGCCTCAAGGAATGCATCCTTAGTGGTCTTCTCTCAGTTGATGGCCTCAAAGTGTTGCATATGGATCAAAATGACTACTATGGAGGGGCTTCTACATCTCTCAATCTTACACAGCTATTTAAGCGGTATAGGGGAGATGACAAGCCACCAGAGACCTTGGGCTCGAGCCGAGAATACAATGTTGATATGATACCTAAGTTTATGATGGCCAATGGAGCTTTGGTTCGTGTGCTCATTCATACCGATGTTACAAAGTATTTGAATTTTAAAGCTGTAGATGGAAGCTTTGTGTATAATAAGGGAAAGATTTACAAAGTTCCGGCAACAGATGTTGAAGCACTGAAGTCACCTTTAATGGGTCTGTTTGAGAAGCGTCGAGCTAGGAAGTTCTTCATTTATGTCCAAGACTATGAAGCAAATGATCCCAAATCTCACGAAGGCCTTGATTTGAACGAAGTTACAGCAAGGCAGCTGATTTCGAAATATGGATTGGAAGATGATACAGTCGACTTTATTGGTCATGCCTTGGCACTTCATCTTGATGACAGTTACTTGGATAAGCCAGCCAAGGATTTCGTGGACAGAGTTAAGACTTATGCAGAGTCCCTGGCACGCTTTCAAGGAGGTTCACCTTACATATATCCGCTATACGGACTGGGAGAGTTGCCTCAGGCGTTTGCACGTTTGAGTGCTGTGTACGGTGGAACTTACATGCTGAACAAGCCAGAATGCAAGGTAGAGTTTGACGGTGATGGTAAAGCTATCGGTGTGACTTCAGAAGGAGAAACAGCAAAATGCAAGAAAGTGGTGTGTGATCCATCATATCTGCCCGATAAGGTTCAAAATGTTGGAAAAGTTGCGCGTGCGATTTGCATTATGAGCCATCCTATTCCAGACACTAATGATTCTCACTCGGCACAAGTCATTCTACCACAGAAGCAACTTGGTCGTAAATCAGACATGTATCTTTTCTGCTGCTCTTATGCTCACAATGTAGCTCCAAAAGGAAAATATATTGCTTTTGTTACAACAGAAGCAGAAACTGACCAACCTGAGGTTGAATTGAAGCCAGGAATTGACCTTCTTGGACCAGTTGATGAGATATTCTATGACATCTATGACAGATATGAACCTAACAATGATCATGCTACTGATGGCTGTTTCATCTCTACAAGCTATGATGCTACAACACACTTTGAAACCACAGTAAAGGATGTGGTTCAGATGTACAGTAAGATCACTGGAAAGGTTCTTGATCTTTCTGTTGATCTGAGTGCTGCAAGTGCCACAGCTGAAGAATAA 1338 0.4238 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDQNDYYGGASTSLNLTQLFKRYRGDDKPPETLGSSREYNVDMIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQDYEANDPKSHEGLDLNEVTARQLISKYGLEDDTVDFIGHALALHLDDSYLDKPAKDFVDRVKTYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDGDGKAIGVTSEGETAKCKKVVCDPSYLPDKVQNVGKVARAICIMSHPIPDTNDSHSAQVILPQKQLGRKSDMYLFCCSYAHNVAPKGKYIAFVTTEAETDQPEVELKPGIDLLGPVDEIFYDIYDRYEPNNDHATDGCFISTSYDATTHFETTVKDVVQMYSKITGKVLDLSVDLSAASATAEE 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03963 445 Pfam GDP dissociation inhibitor 1 433 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 SUPERFAMILY FAD/NAD(P)-binding domain 390 433 IPR036188 -
Trre7g03963 445 PRINTS Rab GDI/REP protein family signature 212 229 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 PRINTS Rab GDI/REP protein family signature 135 150 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 PRINTS Rab GDI/REP protein family signature 69 86 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 PRINTS Rab GDI/REP protein family signature 24 41 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 PRINTS Rab GDI/REP protein family signature 86 102 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 PRINTS Rab GDI/REP protein family signature 230 251 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 PRINTS Rab GDI/REP protein family signature 6 24 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 PRINTS Rab GDI protein signature 280 294 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PRINTS Rab GDI protein signature 125 140 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PRINTS Rab GDI protein signature 381 400 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PRINTS Rab GDI protein signature 16 28 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PRINTS Rab GDI protein signature 402 422 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PRINTS Rab GDI protein signature 323 339 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PRINTS Rab GDI protein signature 75 88 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PRINTS Rab GDI protein signature 348 366 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PRINTS Rab GDI protein signature 182 196 IPR000806 GO:0005093|GO:0015031
Trre7g03963 445 PANTHER RAB GDP-DISSOCIATION INHIBITOR 1 438 IPR018203 GO:0005092|GO:0007264
Trre7g03963 445 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 118 223 - -
Trre7g03963 445 FunFam Guanosine nucleotide diphosphate dissociation inhibitor 118 223 - -
Trre7g03963 445 SUPERFAMILY FAD/NAD(P)-binding domain 1 355 IPR036188 -
Trre7g03963 445 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 57 387 - -
Trre7g03963 445 Gene3D - 2 429 IPR036188 -
Trre7g03963 445 FunFam Guanosine nucleotide diphosphate dissociation inhibitor 297 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03963 Trre-Chr7 47846136 47849381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03963 K17255 - gmx:100792036 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03963 7 47846136 47849381 Trre7g03963 7 47846136 47849381 ECH