Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03309 ATGGGAGAGAGGGTGGATAAGTCTAACATGAGCATGAGCTCTAATTCTAAACAAAACAGTGCTATCGCTGGGAAAAAAATGTACCAAAAACAGTTGGTTGCGTCGCGTCCTAAAGGCTTTGCACAAAGATATTGTGAACCCCTTGTTTCATTGAGGGATAGTGACTTTGGAAACAGTGCTTTGGGGCGTGCCACATTTTTTTTACTTAAAGTTGCTGCTTTAGAGACTGTAAGGAGGTTCTCCAAGAGTAGATGCCCATGTGTGTGGCGAGGTCTGCAGGGTCTACAAATCCTTGTCTCTCTACCATTTGGAGGAATTCAGAGGTGGGCTACCTTCAGGGGTTTGGTCAAAAGCATGCAGGTACTATCAAGACCATTATTATTCCTTTCCATTGCAACAGTCTTTACTGATGAACTGGAATGTAGTGATGGAACCTCAGATCATATTACTGACTCTCAAGATTCAGAAATATCTGCAGCAGAACCATCTCCTGTGCAGGATAATTTGAATATTAGTCAACCCGAGAGAGCTCCTGAAGTTTTAGAATATGAAAAATGGTTGAATCAACTCAACCAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAACGACGATGAGCTCCACAGATTTTACGCAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACAATACGCTGGCGAGAGTGTTACAAAATTCTTTCAGTAGAAGAACTGGAGATGTGGTCAAATATGGTGTTCTGGCATGGATCCGATTTGTTGCACAGACCCTGTCTCATTGTAAGGCTTGGGATGGCTTGCAGCTCACTGGCCTCCCAAGATAAACCTCGATTTGCTCAGGCTATTGTATCACAGGTAGAATATGGTGTCTTGCACTTAGTTGATAGAGAGAACCCTCAAATTACAGTATTGGTTGACTGTGAAGGGTTATCTCCATTGAGAATTCCCATGCAAATACTGAGATCTTGTTCTTCCATTCTGCAAGATCATTTTCCTAATCGTCTTGGTTGTTTGTTTGTCATAAGACTTCCCGCAATTGCTCGTGTTATTGCCCAGACTTTTATTCAGGTTATAAAGCCAGCTACTAAGAAAAAGTTGAAAATTGAAGGAGAGATGTACAAGAAGGTTCTTTATGACAATCTGCCAACACTACCATTATATCTTGGAGGCTGCTGCACATGCGAGAAATGTTCTAAAATGGTCAATCGCAATATGGTGCAACCTCGTGAAACTGGAACCACCAGCAGCAGGATTGTTAGGGAGGATGATATCAGTGACAGCGAGGATTCACCATCACTGCATCCATCTATTGTATTAGAAGACCAACAAAACAACAACTATGATCAGTTGTTGAGAACTGCTGTCATAAGTCTTCTCGTATTTTGGGTTGTCGTAGCACTTGGTGCTGGAATATATGAACCCGGAGGCGGCACTCTTTCAGATTCACAGATTAAAGATCTCCAGTTTTGGCTTGCACAGTGCAATAAAAAGGGTTTGTTTGTAGGTTTTATAATAACTTCTCTTTTTTAA 1551 0.4139 MGERVDKSNMSMSSNSKQNSAIAGKKMYQKQLVASRPKGFAQRYCEPLVSLRDSDFGNSALGRATFFLLKVAALETVRRFSKSRCPCVWRGLQGLQILVSLPFGGIQRWATFRGLVKSMQVLSRPLLFLSIATVFTDELECSDGTSDHITDSQDSEISAAEPSPVQDNLNISQPERAPEVLEYEKWLNQLNQELENQGISLPERINDDELHRFYAASNNDFSCFLTSIKKTIRWRECYKILSVEELEMWSNMVFWHGSDLLHRPCLIVRLGMACSSLASQDKPRFAQAIVSQVEYGVLHLVDRENPQITVLVDCEGLSPLRIPMQILRSCSSILQDHFPNRLGCLFVIRLPAIARVIAQTFIQVIKPATKKKLKIEGEMYKKVLYDNLPTLPLYLGGCCTCEKCSKMVNRNMVQPRETGTTSSRIVREDDISDSEDSPSLHPSIVLEDQQNNNYDQLLRTAVISLLVFWVVVALGAGIYEPGGGTLSDSQIKDLQFWLAQCNKKGLFVGFIITSLF 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03309 516 CDD SEC14 244 397 IPR001251 -
Trre7g03309 516 MobiDBLite consensus disorder prediction 1 22 - -
Trre7g03309 516 MobiDBLite consensus disorder prediction 7 22 - -
Trre7g03309 516 Pfam CRAL/TRIO domain 251 388 IPR001251 -
Trre7g03309 516 MobiDBLite consensus disorder prediction 151 171 - -
Trre7g03309 516 SUPERFAMILY CRAL/TRIO domain 248 402 IPR036865 -
Trre7g03309 516 MobiDBLite consensus disorder prediction 145 171 - -
Trre7g03309 516 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 255 403 IPR001251 -
Trre7g03309 516 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 8 475 - -
Trre7g03309 516 SMART sec14_4 247 400 IPR001251 -
Trre7g03309 516 Gene3D - 181 435 IPR036865 -
Trre7g03309 516 MobiDBLite consensus disorder prediction 422 436 - -
Trre7g03309 516 MobiDBLite consensus disorder prediction 415 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03309 Trre-Chr7 32447952 32453183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03309 - - gmx:100814843 691.034