Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03298 ATGGCTTCTTCTTCTTCTTCTTCTTCCTCCCTTCTCATTTTCACTTTCCTCTTTCTAACCATCTTCTCACCCTCACAAGCTCTCATCTTCACCTTCGTCAACAACTGCCCATACACTGTCTGGCCTGCTATCCTGCCCAACGAAGGCTTCCCCGTCCTCTCCACCAGCGGCTTCGAACTCCGCCACTTCACTCACCTCTCCATCCCAGTCCCAGACACCCACTGGGCCGGCCGTGCTTGGGCCAGAACCGGATGCACAACCACCGACAACCAATTCACCTGCCTTACAGGCGACTGCGGTAACCGTCTCCAATGCAACCGTCAAGGCGGTTTAGCCCCTACAACATTAGTCCAGTTCGACGTACATCACGGTAACAGCGACTTCTCATCTTACAGTGTTAGTCTCGTCGACGGTTTCAACGCTCCGATGACGGTTACTCCTCATGAAGGTAAGGGTGAGTGTCCGGTGGTTGGTTGCCGTGCTGATCTTGTTGCCACGTGTCCACCTGTTTTACAGCACCGTGTTCCGGCGGTTCATGGTCCTGTTGTGGCTTGTAAGAGTGGTTGTGAAGCTTTTCACACCGATGAGCTGTGTTGTAGGAATCACTTTAATAACCCTCAAACGTGTAAGCCTTCTGTGTATTCCACGCACTTTAAGCACGCGTGTCCTGCAACTTTTACCTACGCCCATGATACTCCTTCTTTGACTCATCAGTGTTCTTCACCTCGTGAGCTTAAGGTTATCTTTTGCCATTGA 756 0.5132 MASSSSSSSSLLIFTFLFLTIFSPSQALIFTFVNNCPYTVWPAILPNEGFPVLSTSGFELRHFTHLSIPVPDTHWAGRAWARTGCTTTDNQFTCLTGDCGNRLQCNRQGGLAPTTLVQFDVHHGNSDFSSYSVSLVDGFNAPMTVTPHEGKGECPVVGCRADLVATCPPVLQHRVPAVHGPVVACKSGCEAFHTDELCCRNHFNNPQTCKPSVYSTHFKHACPATFTYAHDTPSLTHQCSSPRELKVIFCH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03298 251 SMART tha2 30 251 IPR001938 -
Trre7g03298 251 Gene3D Thaumatin 29 250 IPR037176 -
Trre7g03298 251 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Trre7g03298 251 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Trre7g03298 251 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Trre7g03298 251 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Trre7g03298 251 PIRSF PR5 1 251 IPR001938 -
Trre7g03298 251 FunFam THAUMATIN-LIKE PROTEIN 1 28 251 - -
Trre7g03298 251 CDD TLP-PA 29 250 - -
Trre7g03298 251 SUPERFAMILY Osmotin, thaumatin-like protein 29 250 IPR037176 -
Trre7g03298 251 Pfam Thaumatin family 34 250 IPR001938 -
Trre7g03298 251 ProSiteProfiles Thaumatin family profile. 27 251 IPR001938 -
Trre7g03298 251 PANTHER OS03G0233200 PROTEIN 15 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03298 Trre-Chr7 31984273 31985028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03298 12 250 Receptor kinase-like Gene Family AT5G38280 38.057 9.84e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03298 - - cam:101503313 444.506