Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03248 ATGGGTACCCCCCAAAAGGAGAATGAAAGCAAGGGTTTCTTTTCCGCAATGTCTTCCCGTTTTTCTGTCTTCAGCAACGCTATCCGATCTGTTAACGGGCTTCTTGGATATGAAGGTGTAGAAGTCATAAACCCAGATGGTGGTAAAGATGATGTAGATGATGAAGTTCAGAGAGGAAGATGGAAACCGGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAATTATATTGGGGCAGATGTAACATCACTGGTGACATTGCCAGTTATTATATTTGAACCAATGACTATGCTCCAAAAAATGGCCGAGTTGATGGAATACTCCCACTTGTTAGATCAAGCAGATGAATCAGAGGATCCTTACATGCAGTTGGTGTATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAATTGACCAACCATAATGGAATTACATTTCTTGCGGAACAGGTTAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAACATTTTACATATGACGTGACTTCCAAGTTAAAAACTAAGTTCTTGGGGAATTCTGTTGATGTGTACCCTGTTGGAAGGACGCGTGTGACCCTTAAGAAGCACGGTGTAGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAATAACTTGATTTTTGGCCGGACTTGGATTGATTCACCTGGGGAAATGATAATGACAAATCTGACAACCGGAGACAAAGCCGTACTTTACTTTCAACAATGTGGATGGTTTGGTGCTGGTCGCTATGAAGTGGATGGTTATGTTTATAATTCTTCTGAAGAGCCCAAAATTTTGATGACTGGGAAATGGAATCAGTCAATGAATTATCAACCTTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCACCAAATGATAAATTCCAGTATACACATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCCAAAAAGTTGTTGGCATCAGACTCACGTCTACGTCCAGATAGATATGCACTTGAGTTGGGTGATCTGTCAAAATCTGGGACAGAAAAGAGCAGTTTGGAAGAGAGGCAGCGTGCTGAAAAGAGAGCTCGGGAAGAAAAGGGGCATAAATTCACACCAAGATGGTTTGAGTTGACTGAAGAAGTGACAACGACTCCTTGGGGTGATTTGGAGATCTACCAATATAATGGTAAATACACGGAACATCGGGCTGCTGCAGATAACTCTGGCAGTATTGATGATGCTGATGTTAAATCAATTGAATTCAATCCATGGCAGTTTGCTGACTTGGCCACGGAATGA 1371 0.4216 MGTPQKENESKGFFSAMSSRFSVFSNAIRSVNGLLGYEGVEVINPDGGKDDVDDEVQRGRWKPEERDGYWKMMQNYIGADVTSLVTLPVIIFEPMTMLQKMAELMEYSHLLDQADESEDPYMQLVYASSWAISVYFAYQRTWKPFNPILGETYELTNHNGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKKHGVVLDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQQCGWFGAGRYEVDGYVYNSSEEPKILMTGKWNQSMNYQPCDSEGEPLPNTELKEVWHVADVPPNDKFQYTHFAHKINSFDTAPKKLLASDSRLRPDRYALELGDLSKSGTEKSSLEERQRAEKRAREEKGHKFTPRWFELTEEVTTTPWGDLEIYQYNGKYTEHRAAADNSGSIDDADVKSIEFNPWQFADLATE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03248 456 MobiDBLite consensus disorder prediction 369 389 - -
Trre7g03248 456 FunFam Oxysterol-binding protein-related protein 3C 358 451 - -
Trre7g03248 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Trre7g03248 456 SUPERFAMILY Oxysterol-binding protein-like 62 436 IPR037239 -
Trre7g03248 456 Gene3D - 358 451 - -
Trre7g03248 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 58 426 IPR000648 GO:0008289
Trre7g03248 456 Gene3D - 150 327 - -
Trre7g03248 456 FunFam oxysterol-binding protein-related protein 3C 150 327 - -
Trre7g03248 456 Pfam Oxysterol-binding protein 69 426 IPR000648 GO:0008289
Trre7g03248 456 MobiDBLite consensus disorder prediction 371 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03248 Trre-Chr7 30821506 30829698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03248 - - gmx:100810228 833.172