Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03220 ATGTCGGGCGGTTTCTTTCGCGGTACATCTGCTGATCAAGACACTCGGTTTTCGAACAAGCAAGCAAAGCTGCTTAAATCGCAGAAGTTTGCACCAGAATTGGAGCATCTGGTGGACACGACAAAGGTGAATATGGAAGTAATGAAACCTTGGATTGCTAGAAAAGTGACCGAGCTTCTTGGGTTTGAAGATGAAGTGCTTATTAACTTCATACATGGTCTTCTGGAAGCAAAGATAGTGAACGGGAAGGAAGTTCAAATACAAATTACTGGATTCATGGAAAAAAACACTGTCAAGTTCATGAAAGAGCTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCGAGTGGTGTTCCTCAGCAGTTCTTGGATGCTAAAGAAGAAGAACTCCTGAAAAAGAAGGCTGAACATGATAGAATAACAAGTGAAATTCAGAGGAAGAAAGATAAGGAAAGTAAAGAGATCAGGGAGGAGAGGTTGAAGAAACTGGACGGAGGATTAGATGCGAAAGATAATGATACAGCTTCAGACCGAACTTTGAAGCCCAGGGATTCAGGGAACTACATTCAGGATGGGAAAGAAACTGACAAGAGGAATGGTGTTAGAGCAAGGAACAGGGTTTCTAGGTCCCCACATTCACATGCAGTTTTCACCTCGCCTCATCGAGGCTCACCTTCAAGGGCAAACAGTAAATCATTTTCAAATTCCCGAAGTTATTCAAGATCTCCAGAGGCTCGAGGGCGCTCCGTTTCTTCTGGAAGGCTAAAACGTTCTTCACGGCAACAGTCTATTTCTCCTCGAAGGCGCTCACCACAACGATCTCCTCATAGGAGGCCATCCTATTCAAGGAGAAGATCAAGATCTGCCTCAGATTCCAAATCTCCTATACGACGTGGAATGCATTCTCCATTTCGTCGACGCAGAACACCCTCTCCTGTTAAAAGACGTAGATCCCCCTCTCCAGTGCGACGGCGTAGATCGCCCTCTCCGGTGCGACGGCGTAGATCACCCTCTCCAGTACGACGACACAGATCACCACCCTCTCCAATACGACGACGCAGATCACCACCTTCTCCAGTACGACGACGCAGATCACCTTATCCTGTGCGGCGACGCAGATCTCCCTCTCCTGTACGACGCCGCAGATCACCTTCTCCTATGCGACGACGCAAATCACCTTCTCCAATGCACCTACGTAGATCACCATCACCTGTTAGAGGAAGAAGGGCACCCTTGCCCATGCAACAGGTATCACCTAGCATCCAGCGTAGGTCACCTTCACCGTTGCGCCGAATACCACCAAGCCGTGGCCGTAGGTCAAGCTCTCCAATACAATCCCCCACAATGCGAAGGTATGATAGTAGAACTCCGCGGCGCAGGTCTCCGTCTCCCTTACGCTATAGATCACCTGTTTCTGGCAAGAAAAGATCTCCAAGTGCCTCCCCTAAGAGGTCTCCTTCTCGAGATGAATGGAGTTCTCAGTCTCCTGTACGTAAATCTCCATCTCCAGCCAGGAGAATTTCACCAAGACACCAAAGAAGTCCTGTGCAGTCTTCTATGGGAAGAGTCAGGGTGCAAAATAAGTTGTCACCGGAAGTTTATCAACCCTCTAGTCCTTTGCAGTCTGTACAAAGAGATAAAAATGGAAAAGCTTCGGGCTATGAATCTCCAGATTCAATATCCACACCAGATAAGTCTCCAATTCGATCAATATCACCACAAGCAAGAAGTAGGACCAGCAGTAAAAATAGAAGTCCACATGAAATCCCTCTGAGGCAAACAAGAGAGAACTTGACCAAGGAAGGGAGCTTGAGTCCACCAAAAAAATCAACAAACCATAAGCCTAGGCATGACATCCCAGAGACCAGTGATGGAGCAGAAGAATCATATTATTCTAGAGAGCGCAGAGATCCTAAATCAAATTCATCTGAAAAGAAATCAAGACACTCCTCCCCGGTTAGTAAGCGAATAGGTTCATCTGCAAAATTTCATCACGAGGATGAGTTTTATCCTGAAAGGGCAGCTAGTCGTGTGGCTTCTGAGTATGATCATGATACCAATAAATGGAGTAAGAAAGGCCAGGATATAAAATGTGATGAATCTTCTGGCAAGGGAGGTGAGTCTCCTGGTCAACAAAAGTCACCAATGAACAAAGAATTTATTTCTAGCGAGAAGGCTCGTGATTCTTATGCAGCAAAAATAAAAAAATTTGATGACAAGGATCAATCCAATTCAAAATATACCAAAAGCAGTGATCAACACAACAAATCAGAAGCTGCACAAGATTTAGTTGGAAAAGTTGATCATGTCAATCAGAGTGCTTCTTATGATTCTGTTTCTGAAGAAAGTGGTAAGCATAGAAAGGATGGAAAGGATAGGAGAAAGCATAAAAGGTCAGAGAGAAAAGTTGACTCATCTGATGAGAATGATAGTTCTGATTCTGAGTTAGAGGACCGGAAAGAGGCCAAGAGGAGGAAAAAGGAGAAGAAGAAGCTGCGAAAGGAGGAAAAACATCGAAAGCGGGAAGAGCGGCGGCGAAAAAGGGAAGAACGGCATGCTGAAAAGCTGAAAATGAAGAGTAAAACAGACTATATTTCAGATGACGAGGAAATTGAACGAAGGGATGATAAAGAGGCTCCGTATGATCCAAAGAAGCTTGAGATCGAGCTACGGAATAAGGCTCTTGAATCCCTTAAAGCAAAGAGGGGAATGAATAATTAA 2721 0.4495 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDTTKVNMEVMKPWIARKVTELLGFEDEVLINFIHGLLEAKIVNGKEVQIQITGFMEKNTVKFMKELWTLLLSAQKNASGVPQQFLDAKEEELLKKKAEHDRITSEIQRKKDKESKEIREERLKKLDGGLDAKDNDTASDRTLKPRDSGNYIQDGKETDKRNGVRARNRVSRSPHSHAVFTSPHRGSPSRANSKSFSNSRSYSRSPEARGRSVSSGRLKRSSRQQSISPRRRSPQRSPHRRPSYSRRRSRSASDSKSPIRRGMHSPFRRRRTPSPVKRRRSPSPVRRRRSPSPVRRRRSPSPVRRHRSPPSPIRRRRSPPSPVRRRRSPYPVRRRRSPSPVRRRRSPSPMRRRKSPSPMHLRRSPSPVRGRRAPLPMQQVSPSIQRRSPSPLRRIPPSRGRRSSSPIQSPTMRRYDSRTPRRRSPSPLRYRSPVSGKKRSPSASPKRSPSRDEWSSQSPVRKSPSPARRISPRHQRSPVQSSMGRVRVQNKLSPEVYQPSSPLQSVQRDKNGKASGYESPDSISTPDKSPIRSISPQARSRTSSKNRSPHEIPLRQTRENLTKEGSLSPPKKSTNHKPRHDIPETSDGAEESYYSRERRDPKSNSSEKKSRHSSPVSKRIGSSAKFHHEDEFYPERAASRVASEYDHDTNKWSKKGQDIKCDESSGKGGESPGQQKSPMNKEFISSEKARDSYAAKIKKFDDKDQSNSKYTKSSDQHNKSEAAQDLVGKVDHVNQSASYDSVSEESGKHRKDGKDRRKHKRSERKVDSSDENDSSDSELEDRKEAKRRKKEKKKLRKEEKHRKREERRRKREERHAEKLKMKSKTDYISDDEEIERRDDKEAPYDPKKLEIELRNKALESLKAKRGMNN 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03220 906 MobiDBLite consensus disorder prediction 705 719 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 611 651 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 720 763 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 847 881 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 659 702 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 299 396 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 799 823 - -
Trre7g03220 906 SMART pwi_2 40 114 IPR002483 GO:0006397
Trre7g03220 906 MobiDBLite consensus disorder prediction 142 881 - -
Trre7g03220 906 Coils Coil 123 143 - -
Trre7g03220 906 Coils Coil 819 859 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 824 846 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 474 501 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 142 180 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 211 269 - -
Trre7g03220 906 Gene3D PWI domain 33 125 - -
Trre7g03220 906 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 446 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 187 203 - -
Trre7g03220 906 MobiDBLite consensus disorder prediction 581 595 - -
Trre7g03220 906 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Trre7g03220 906 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Trre7g03220 906 MobiDBLite consensus disorder prediction 511 580 - -
Trre7g03220 906 Pfam PWI domain 46 115 IPR002483 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03220 Trre-Chr7 30356649 30362290 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03220 K13171 - gmx:100810238 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03220 7 30356649 30362290 Trre7g03220 7 30356649 30362290 ECH