Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03218 ATGGTTCCCACTCTTTCATCCAATTCTTCTCTATTTCCAACCACACCACATTTAAGGTTGAATTTCAGAAACCAAACACGATTCAATGTCTATGCTAAGAAATCTGGTGGAGGTTCATTTCCATCATTTGGATTAGGAAAACCAAAAGATGAAGAAAAAGATGGTTCATCATCAAATTCTAATAACCCTTTTGGTTTTGACTTTGGAAAATTACCTGATGTCACTTCTTTGATACCTGTTGGTAGCAAAAACTCTTCTTTGCCAGGTTTATCATTTGGAAGTCCTAGGAGGAAGGATTCTTCAACGGTTTTTGTTGCCGGTGCTACTGGTCAGGCTGGTATTCGCATTGCTCAAACTTTGCTTAGGGAAGGGTTTAGTGTTAGAGCTGGTGTTCCTGAACTTGGTTCTGCTCAGGAGTTGGCTCAACTTGCTTCTCAATATAAGATTATATCAAATGAAGAGGCAAAGCGTCTCAATGCTGTGGAGTCAAGCTTTGATGATGCAAATTCAATAGCAAAAGCAATAGGCAATGCAAGCAAAGTGGTTGTCACCATTGGTCCCACAGAGAATGGTCCAACGGCCGAGGTTTCCACTACAGATGCCTTGCAAGTAATTCTGGCTGCCCAGCTTGCAGGTGTGGGCCATGTTGCAGTCATCTACGACGACAACAAAAATGGCGCCGGCACCTCAACCAACAATGTACTTGATGGCATTTCCTCTTTCTTCAACAACCTCTTCTCTAAGTCTCAACCTTTGTCGATTCAAGAGTTCTTGCAGAAAGTGGTTGAAACAGATGTCAAATATACCTTAATCAAGACATCTTTGACAGATGATTTCTCGCCGGAGAATTCTTATAATGTGGTCGTCTTAGGCGAAGAAAACACCGGTTCAAACGACTATAAAGTAACAAAGTCGAAGATAGCATCGTTGGTCTCTGATGTCTTCTCCAACACACAGGTTGCAGAAAACAAGGTTGTGCAAGTGTACTCAGACCCGAATGCTCCTTTGAAGCGTGTTGACGAACTTTTCAGCACTATTCCAGAAGATAGCAGAAGGAAAGTCTATGCTGAAACATTGGAGAAAGCCAAAGCGGAGGAAGAGGAAAGAGTGGCAGCAGAAAAGGCACGCGAAGAAGCTGAAACAATAAAGAAGGAAGAAGAGGTGATAAAGCTTTCAAAGAAAGGAGCGCAGGCTTCTAATGTAGCTAAAGAAGCTAAAGAGAAAGCGGAAGCAGCTGGACCATCAGTGGATGACATCTTGAATAAGGCAAAAGATTTTAGTTCAGGGTTTTCATGGCAAAAGTTCAGCTCACAGGTTGTCACAATTCCAAAGCCCGACGAGGATGAGGAACCTAAGGTGAAAGTGGCCACTGTGAGGGGACAGGCGAAAGCTCGGAGTCTCTTTCCGAATAAAGTGGTTACTAAACAAACAACTCCAAAAAGCAGTCAGAGTAAACCAAAGGAGGAAAAAGTAAAGGTAGCAGAGAAACCAAAAGAGGTTAGGAAGGTATTTGGTGGTCTGTTTAAGCAAGAGACTATCTATGTTGATGATGACTAG 1557 0.4252 MVPTLSSNSSLFPTTPHLRLNFRNQTRFNVYAKKSGGGSFPSFGLGKPKDEEKDGSSSNSNNPFGFDFGKLPDVTSLIPVGSKNSSLPGLSFGSPRRKDSSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELGSAQELAQLASQYKIISNEEAKRLNAVESSFDDANSIAKAIGNASKVVVTIGPTENGPTAEVSTTDALQVILAAQLAGVGHVAVIYDDNKNGAGTSTNNVLDGISSFFNNLFSKSQPLSIQEFLQKVVETDVKYTLIKTSLTDDFSPENSYNVVVLGEENTGSNDYKVTKSKIASLVSDVFSNTQVAENKVVQVYSDPNAPLKRVDELFSTIPEDSRRKVYAETLEKAKAEEEERVAAEKAREEAETIKKEEEVIKLSKKGAQASNVAKEAKEKAEAAGPSVDDILNKAKDFSSGFSWQKFSSQVVTIPKPDEDEEPKVKVATVRGQAKARSLFPNKVVTKQTTPKSSQSKPKEEKVKVAEKPKEVRKVFGGLFKQETIYVDDD 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03218 518 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 219 IPR036291 -
Trre7g03218 518 Coils Coil 355 385 - -
Trre7g03218 518 MobiDBLite consensus disorder prediction 466 494 - -
Trre7g03218 518 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 518 - -
Trre7g03218 518 Pfam NAD(P)H-binding 107 317 IPR016040 -
Trre7g03218 518 Gene3D - 90 336 - -
Trre7g03218 518 MobiDBLite consensus disorder prediction 41 64 - -
Trre7g03218 518 MobiDBLite consensus disorder prediction 442 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03218 Trre-Chr7 30319676 30322558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03218 - - cam:101513087 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03218 7 30319676 30322558 Trre7g03218 7 30319676 30322558 ECH