Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03216 ATGAATCAAGCTTGTCTCTGTGCTGTCCCAAATCCAACAGCAGCTACTCTCCCACTCTACTCAAACGCCAATGGTTCTCCAACAACCACCTCTTTCAACCTTACAAAATCATCACAAACCACTCGCACCACACGGATTCGAAACCAACCCATGTTACATTCGCACACCCAAACACACCATAAGTGGTCTCTTAGCGGTATGACAGCTCTTGTCACAGGTGGAACTCGCGGAATTGGCCATGCCATTGTTGAGGAATTGATAGGGTTTGGTGCCAAAGTGCATACTTGTGCCAGAAATGAAGACGATCTTGGTAAATGTCTGAATGAATGGAATCATTTGGGTTTTGAGGTTACTGGCTCCATTTGTGATGTGTCAGTTCCACGTCAGAGGGAAGTGCTTATGGAAGATGTTTCCTCTGTCTTCAATGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCAATGACAGACTTCACAGCAGCAGAGTTTTCCACTCTCATTGATACCAATTTAGGATCCACCTTTCATATGTGCCAACTTGCATATCCACTTCTCAAAGCATCAGGAGTGGGTAGTGTTGTTTTTATCTCTTCTGTTTCTGGTTTTGTCTCACTGAAGTCAATGTCTGTTCAAGGAGCAACAAAAGGAGCAATTAATCAACTTACAAAAAATCTTGCTTGTGAGTGGGCAAAAGACAACATAAGGACTAATGCAGTTGCACCTTGGTACATCAGAACGTCGATGGTAGAGCAAGTAATTTTCTTCTTCTTTATCCTATGA 795 0.4264 MNQACLCAVPNPTAATLPLYSNANGSPTTTSFNLTKSSQTTRTTRIRNQPMLHSHTQTHHKWSLSGMTALVTGGTRGIGHAIVEELIGFGAKVHTCARNEDDLGKCLNEWNHLGFEVTGSICDVSVPRQREVLMEDVSSVFNGKLNILINNVGTNIRKPMTDFTAAEFSTLIDTNLGSTFHMCQLAYPLLKASGVGSVVFISSVSGFVSLKSMSVQGATKGAINQLTKNLACEWAKDNIRTNAVAPWYIRTSMVEQVIFFFFIL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03216 264 PRINTS Glucose/ribitol dehydrogenase family signature 68 85 IPR002347 -
Trre7g03216 264 PRINTS Glucose/ribitol dehydrogenase family signature 143 154 IPR002347 -
Trre7g03216 264 PRINTS Glucose/ribitol dehydrogenase family signature 216 235 IPR002347 -
Trre7g03216 264 PRINTS Glucose/ribitol dehydrogenase family signature 190 206 IPR002347 -
Trre7g03216 264 PRINTS Glucose/ribitol dehydrogenase family signature 237 254 IPR002347 -
Trre7g03216 264 Gene3D - 49 259 - -
Trre7g03216 264 FunFam Short-chain dehydrogenase reductase 53 261 - -
Trre7g03216 264 Pfam short chain dehydrogenase 68 256 IPR002347 -
Trre7g03216 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 62 258 IPR036291 -
Trre7g03216 264 PANTHER TROPINONE REDUCTASE 61 257 IPR045000 GO:0016491
Trre7g03216 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 154 IPR002347 -
Trre7g03216 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 204 IPR002347 -
Trre7g03216 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 216 235 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03216 Trre-Chr7 30303713 30305564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03216 61 258 Miscellaneous Gene Families AT2G29290 62.626 8.25e-88 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03216 K08081 - gmx:100799534 349.362